Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cstf1Q99LC2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cstf1Q99LC2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cstf1Q99LC2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cstf1Q99LC2 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cstf1Q99LC2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cstf1Q99LC2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cstf1Q99LC2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Cstf1Q99LC2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cstf1Q99LC2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cstf1Q99LC2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cstf1Q99LC2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cstf1Q99LC2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.62■□□□□ 0.57
Cstf1Q99LC2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cstf1Q99LC2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cstf1Q99LC2 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cstf1Q99LC2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.62■□□□□ 0.57
Cstf1Q99LC2 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cstf1Q99LC2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cstf1Q99LC2 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.62■□□□□ 0.57
Cstf1Q99LC2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cstf1Q99LC2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cstf1Q99LC2 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cstf1Q99LC2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cstf1Q99LC2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cstf1Q99LC2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cstf1Q99LC2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cstf1Q99LC2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cstf1Q99LC2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cstf1Q99LC2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cstf1Q99LC2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cstf1Q99LC2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Cstf1Q99LC2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cstf1Q99LC2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.61■□□□□ 0.57
Cstf1Q99LC2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Cstf1Q99LC2 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.61■□□□□ 0.57
Cstf1Q99LC2 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cstf1Q99LC2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cstf1Q99LC2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.61■□□□□ 0.57
Cstf1Q99LC2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cstf1Q99LC2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Cstf1Q99LC2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cstf1Q99LC2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.6■□□□□ 0.57
Cstf1Q99LC2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cstf1Q99LC2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cstf1Q99LC2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Cstf1Q99LC2 Gm10231-201ENSMUST00000181584 441 ntBASIC18.6■□□□□ 0.57
Cstf1Q99LC2 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cstf1Q99LC2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.6■□□□□ 0.57
Cstf1Q99LC2 Gm10175-202ENSMUST00000208752 441 ntBASIC18.6■□□□□ 0.57
Cstf1Q99LC2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Cstf1Q99LC2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Cstf1Q99LC2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cstf1Q99LC2 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cstf1Q99LC2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cstf1Q99LC2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cstf1Q99LC2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.6■□□□□ 0.57
Cstf1Q99LC2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cstf1Q99LC2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Cstf1Q99LC2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Cstf1Q99LC2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cstf1Q99LC2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cstf1Q99LC2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Cstf1Q99LC2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cstf1Q99LC2 Gm6433-201ENSMUST00000118634 875 ntBASIC18.59■□□□□ 0.57
Cstf1Q99LC2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.59■□□□□ 0.57
Cstf1Q99LC2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cstf1Q99LC2 Gm5417-201ENSMUST00000079706 384 ntBASIC18.59■□□□□ 0.57
Cstf1Q99LC2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cstf1Q99LC2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cstf1Q99LC2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Cstf1Q99LC2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cstf1Q99LC2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cstf1Q99LC2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.58■□□□□ 0.57
Cstf1Q99LC2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cstf1Q99LC2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cstf1Q99LC2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Cstf1Q99LC2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cstf1Q99LC2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cstf1Q99LC2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.58■□□□□ 0.56
Cstf1Q99LC2 Gm43799-201ENSMUST00000201845 579 ntBASIC18.58■□□□□ 0.56
Cstf1Q99LC2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cstf1Q99LC2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cstf1Q99LC2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cstf1Q99LC2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.58■□□□□ 0.56
Cstf1Q99LC2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cstf1Q99LC2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cstf1Q99LC2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cstf1Q99LC2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cstf1Q99LC2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cstf1Q99LC2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cstf1Q99LC2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.57■□□□□ 0.56
Cstf1Q99LC2 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.57■□□□□ 0.56
Cstf1Q99LC2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Cstf1Q99LC2 Mir5122-201ENSMUST00000175004 89 ntBASIC18.57■□□□□ 0.56
Cstf1Q99LC2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cstf1Q99LC2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Cstf1Q99LC2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cstf1Q99LC2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Cstf1Q99LC2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms