Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcd2Q99JR8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcd2Q99JR8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcd2Q99JR8 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcd2Q99JR8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcd2Q99JR8 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcd2Q99JR8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcd2Q99JR8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Smarcd2Q99JR8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcd2Q99JR8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcd2Q99JR8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcd2Q99JR8 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcd2Q99JR8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcd2Q99JR8 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.94■□□□□ 0.62
Smarcd2Q99JR8 Mir1199-201ENSMUST00000117015 119 ntBASIC18.94■□□□□ 0.62
Smarcd2Q99JR8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Smarcd2Q99JR8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcd2Q99JR8 Flg-201ENSMUST00000050758 1488 ntBASIC18.94■□□□□ 0.62
Smarcd2Q99JR8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcd2Q99JR8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcd2Q99JR8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcd2Q99JR8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcd2Q99JR8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcd2Q99JR8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.93■□□□□ 0.62
Smarcd2Q99JR8 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Smarcd2Q99JR8 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.93■□□□□ 0.62
Smarcd2Q99JR8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.93■□□□□ 0.62
Smarcd2Q99JR8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.93■□□□□ 0.62
Smarcd2Q99JR8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcd2Q99JR8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcd2Q99JR8 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcd2Q99JR8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcd2Q99JR8 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcd2Q99JR8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcd2Q99JR8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcd2Q99JR8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcd2Q99JR8 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcd2Q99JR8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Smarcd2Q99JR8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Smarcd2Q99JR8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcd2Q99JR8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Smarcd2Q99JR8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Smarcd2Q99JR8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.92■□□□□ 0.62
Smarcd2Q99JR8 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.92■□□□□ 0.62
Smarcd2Q99JR8 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.92■□□□□ 0.62
Smarcd2Q99JR8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.92■□□□□ 0.62
Smarcd2Q99JR8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Smarcd2Q99JR8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.92■□□□□ 0.62
Smarcd2Q99JR8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.92■□□□□ 0.62
Smarcd2Q99JR8 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcd2Q99JR8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcd2Q99JR8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Smarcd2Q99JR8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcd2Q99JR8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcd2Q99JR8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcd2Q99JR8 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.92■□□□□ 0.62
Smarcd2Q99JR8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.91■□□□□ 0.62
Smarcd2Q99JR8 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcd2Q99JR8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Smarcd2Q99JR8 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.91■□□□□ 0.62
Smarcd2Q99JR8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Smarcd2Q99JR8 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.91■□□□□ 0.62
Smarcd2Q99JR8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcd2Q99JR8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcd2Q99JR8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcd2Q99JR8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcd2Q99JR8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcd2Q99JR8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcd2Q99JR8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcd2Q99JR8 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Smarcd2Q99JR8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcd2Q99JR8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcd2Q99JR8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.9■□□□□ 0.62
Smarcd2Q99JR8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.9■□□□□ 0.62
Smarcd2Q99JR8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.9■□□□□ 0.62
Smarcd2Q99JR8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcd2Q99JR8 Gm37055-201ENSMUST00000191866 133 ntBASIC18.9■□□□□ 0.62
Smarcd2Q99JR8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcd2Q99JR8 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcd2Q99JR8 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.9■□□□□ 0.62
Smarcd2Q99JR8 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcd2Q99JR8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcd2Q99JR8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcd2Q99JR8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Smarcd2Q99JR8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcd2Q99JR8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.89■□□□□ 0.61
Smarcd2Q99JR8 Gm11927-201ENSMUST00000118472 759 ntBASIC18.89■□□□□ 0.61
Smarcd2Q99JR8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.89■□□□□ 0.61
Smarcd2Q99JR8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcd2Q99JR8 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Smarcd2Q99JR8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcd2Q99JR8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcd2Q99JR8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcd2Q99JR8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcd2Q99JR8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcd2Q99JR8 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Smarcd2Q99JR8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Smarcd2Q99JR8 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcd2Q99JR8 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcd2Q99JR8 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms