Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Col20a1Q923P0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC22.14■■□□□ 1.13
Col20a1Q923P0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Col20a1Q923P0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Col20a1Q923P0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC22.13■■□□□ 1.13
Col20a1Q923P0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Col20a1Q923P0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Col20a1Q923P0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Col20a1Q923P0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC22.13■■□□□ 1.13
Col20a1Q923P0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Col20a1Q923P0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Col20a1Q923P0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Col20a1Q923P0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Col20a1Q923P0 Gm27275-201ENSMUST00000184318 272 ntBASIC22.12■■□□□ 1.13
Col20a1Q923P0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Col20a1Q923P0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Col20a1Q923P0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Col20a1Q923P0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Col20a1Q923P0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC22.11■■□□□ 1.13
Col20a1Q923P0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC22.11■■□□□ 1.13
Col20a1Q923P0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Col20a1Q923P0 Dio3-201ENSMUST00000097228 1449 ntBASIC22.11■■□□□ 1.13
Col20a1Q923P0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
Col20a1Q923P0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col20a1Q923P0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Col20a1Q923P0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col20a1Q923P0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col20a1Q923P0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col20a1Q923P0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Col20a1Q923P0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col20a1Q923P0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Col20a1Q923P0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Col20a1Q923P0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Col20a1Q923P0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Col20a1Q923P0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Col20a1Q923P0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Col20a1Q923P0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Col20a1Q923P0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Col20a1Q923P0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
Col20a1Q923P0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC22.08■■□□□ 1.13
Col20a1Q923P0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Col20a1Q923P0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Col20a1Q923P0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Col20a1Q923P0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
Col20a1Q923P0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Col20a1Q923P0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Col20a1Q923P0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Col20a1Q923P0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC22.08■■□□□ 1.12
Col20a1Q923P0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Col20a1Q923P0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Col20a1Q923P0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Col20a1Q923P0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Col20a1Q923P0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC22.07■■□□□ 1.12
Col20a1Q923P0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Col20a1Q923P0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Col20a1Q923P0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Col20a1Q923P0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col20a1Q923P0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC22.06■■□□□ 1.12
Col20a1Q923P0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC22.06■■□□□ 1.12
Col20a1Q923P0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Col20a1Q923P0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC22.06■■□□□ 1.12
Col20a1Q923P0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col20a1Q923P0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC22.06■■□□□ 1.12
Col20a1Q923P0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col20a1Q923P0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Col20a1Q923P0 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Col20a1Q923P0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col20a1Q923P0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC22.06■■□□□ 1.12
Col20a1Q923P0 AC140264.2-202ENSMUST00000218746 817 ntBASIC22.06■■□□□ 1.12
Col20a1Q923P0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Col20a1Q923P0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Col20a1Q923P0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Col20a1Q923P0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Col20a1Q923P0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Col20a1Q923P0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Col20a1Q923P0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC22.05■■□□□ 1.12
Col20a1Q923P0 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Col20a1Q923P0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC22.05■■□□□ 1.12
Col20a1Q923P0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Col20a1Q923P0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Col20a1Q923P0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col20a1Q923P0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Col20a1Q923P0 Gm8309-201ENSMUST00000206627 1448 ntBASIC22.04■■□□□ 1.12
Col20a1Q923P0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC22.04■■□□□ 1.12
Col20a1Q923P0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Col20a1Q923P0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col20a1Q923P0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Col20a1Q923P0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Col20a1Q923P0 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Col20a1Q923P0 Gm43545-201ENSMUST00000196765 2779 ntBASIC22.04■■□□□ 1.12
Col20a1Q923P0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col20a1Q923P0 Gm21596-201ENSMUST00000178049 1316 ntBASIC22.03■■□□□ 1.12
Col20a1Q923P0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Col20a1Q923P0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col20a1Q923P0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Col20a1Q923P0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC22.03■■□□□ 1.12
Col20a1Q923P0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col20a1Q923P0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Col20a1Q923P0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Col20a1Q923P0 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms