Protein–RNA interactions for Protein: Q921V7

Slc44a3, Choline transporter-like protein 3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a3Q921V7 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Slc44a3Q921V7 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc44a3Q921V7 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc44a3Q921V7 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc44a3Q921V7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slc44a3Q921V7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc44a3Q921V7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc44a3Q921V7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.46■□□□□ 0.55
Slc44a3Q921V7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc44a3Q921V7 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc44a3Q921V7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc44a3Q921V7 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Slc44a3Q921V7 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.46■□□□□ 0.55
Slc44a3Q921V7 Gm13234-201ENSMUST00000120010 747 ntBASIC18.46■□□□□ 0.55
Slc44a3Q921V7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Slc44a3Q921V7 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Slc44a3Q921V7 Gm10493-201ENSMUST00000097270 612 ntBASIC18.46■□□□□ 0.55
Slc44a3Q921V7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.46■□□□□ 0.55
Slc44a3Q921V7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc44a3Q921V7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc44a3Q921V7 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc44a3Q921V7 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc44a3Q921V7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.46■□□□□ 0.55
Slc44a3Q921V7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slc44a3Q921V7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Slc44a3Q921V7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Slc44a3Q921V7 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc44a3Q921V7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc44a3Q921V7 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.45■□□□□ 0.54
Slc44a3Q921V7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc44a3Q921V7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc44a3Q921V7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slc44a3Q921V7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Slc44a3Q921V7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc44a3Q921V7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.44■□□□□ 0.54
Slc44a3Q921V7 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Slc44a3Q921V7 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc44a3Q921V7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.44■□□□□ 0.54
Slc44a3Q921V7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Slc44a3Q921V7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc44a3Q921V7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc44a3Q921V7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slc44a3Q921V7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Slc44a3Q921V7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc44a3Q921V7 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
Slc44a3Q921V7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc44a3Q921V7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Slc44a3Q921V7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc44a3Q921V7 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc44a3Q921V7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Slc44a3Q921V7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Slc44a3Q921V7 Gm42778-201ENSMUST00000199644 553 ntBASIC18.43■□□□□ 0.54
Slc44a3Q921V7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc44a3Q921V7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc44a3Q921V7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.43■□□□□ 0.54
Slc44a3Q921V7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.43■□□□□ 0.54
Slc44a3Q921V7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc44a3Q921V7 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc44a3Q921V7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc44a3Q921V7 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc44a3Q921V7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc44a3Q921V7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.42■□□□□ 0.54
Slc44a3Q921V7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Slc44a3Q921V7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Slc44a3Q921V7 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.42■□□□□ 0.54
Slc44a3Q921V7 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.42■□□□□ 0.54
Slc44a3Q921V7 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.42■□□□□ 0.54
Slc44a3Q921V7 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc44a3Q921V7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Slc44a3Q921V7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc44a3Q921V7 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.42■□□□□ 0.54
Slc44a3Q921V7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Slc44a3Q921V7 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Slc44a3Q921V7 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc44a3Q921V7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc44a3Q921V7 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc44a3Q921V7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.41■□□□□ 0.54
Slc44a3Q921V7 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Slc44a3Q921V7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc44a3Q921V7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc44a3Q921V7 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc44a3Q921V7 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Slc44a3Q921V7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Slc44a3Q921V7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc44a3Q921V7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc44a3Q921V7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Slc44a3Q921V7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc44a3Q921V7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.4■□□□□ 0.54
Slc44a3Q921V7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc44a3Q921V7 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.4■□□□□ 0.54
Slc44a3Q921V7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc44a3Q921V7 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc44a3Q921V7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc44a3Q921V7 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.4■□□□□ 0.54
Slc44a3Q921V7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc44a3Q921V7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc44a3Q921V7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.4■□□□□ 0.54
Slc44a3Q921V7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc44a3Q921V7 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc44a3Q921V7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms