Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.88■□□□□ 0.77
Pcdha9Q91Y11 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Pcdha9Q91Y11 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdha9Q91Y11 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.88■□□□□ 0.77
Pcdha9Q91Y11 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Pcdha9Q91Y11 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.88■□□□□ 0.77
Pcdha9Q91Y11 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.88■□□□□ 0.77
Pcdha9Q91Y11 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.88■□□□□ 0.77
Pcdha9Q91Y11 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Pcdha9Q91Y11 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdha9Q91Y11 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdha9Q91Y11 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdha9Q91Y11 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdha9Q91Y11 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Pcdha9Q91Y11 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.87■□□□□ 0.77
Pcdha9Q91Y11 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdha9Q91Y11 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdha9Q91Y11 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdha9Q91Y11 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.87■□□□□ 0.77
Pcdha9Q91Y11 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdha9Q91Y11 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdha9Q91Y11 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdha9Q91Y11 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdha9Q91Y11 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdha9Q91Y11 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Pcdha9Q91Y11 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdha9Q91Y11 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdha9Q91Y11 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.86■□□□□ 0.77
Pcdha9Q91Y11 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Pcdha9Q91Y11 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdha9Q91Y11 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdha9Q91Y11 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Pcdha9Q91Y11 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdha9Q91Y11 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdha9Q91Y11 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdha9Q91Y11 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdha9Q91Y11 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Pcdha9Q91Y11 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha9Q91Y11 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha9Q91Y11 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha9Q91Y11 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.85■□□□□ 0.77
Pcdha9Q91Y11 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha9Q91Y11 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha9Q91Y11 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha9Q91Y11 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
Pcdha9Q91Y11 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Pcdha9Q91Y11 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.85■□□□□ 0.77
Pcdha9Q91Y11 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.85■□□□□ 0.77
Pcdha9Q91Y11 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.85■□□□□ 0.77
Pcdha9Q91Y11 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha9Q91Y11 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha9Q91Y11 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha9Q91Y11 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha9Q91Y11 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.85■□□□□ 0.77
Pcdha9Q91Y11 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Pcdha9Q91Y11 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Pcdha9Q91Y11 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.84■□□□□ 0.77
Pcdha9Q91Y11 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.84■□□□□ 0.77
Pcdha9Q91Y11 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.84■□□□□ 0.77
Pcdha9Q91Y11 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdha9Q91Y11 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdha9Q91Y11 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdha9Q91Y11 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdha9Q91Y11 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdha9Q91Y11 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdha9Q91Y11 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Pcdha9Q91Y11 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdha9Q91Y11 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.83■□□□□ 0.77
Pcdha9Q91Y11 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdha9Q91Y11 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdha9Q91Y11 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.83■□□□□ 0.77
Pcdha9Q91Y11 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdha9Q91Y11 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdha9Q91Y11 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdha9Q91Y11 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdha9Q91Y11 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdha9Q91Y11 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Pcdha9Q91Y11 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha9Q91Y11 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha9Q91Y11 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha9Q91Y11 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha9Q91Y11 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha9Q91Y11 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha9Q91Y11 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha9Q91Y11 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha9Q91Y11 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha9Q91Y11 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.82■□□□□ 0.76
Pcdha9Q91Y11 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.82■□□□□ 0.76
Pcdha9Q91Y11 Gm37179-201ENSMUST00000194862 823 ntBASIC19.82■□□□□ 0.76
Pcdha9Q91Y11 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.82■□□□□ 0.76
Pcdha9Q91Y11 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.82■□□□□ 0.76
Pcdha9Q91Y11 Gm6365-201ENSMUST00000054711 744 ntBASIC19.82■□□□□ 0.76
Pcdha9Q91Y11 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha9Q91Y11 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha9Q91Y11 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Pcdha9Q91Y11 Golph3-205ENSMUST00000228671 2842 ntBASIC19.82■□□□□ 0.76
Pcdha9Q91Y11 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha9Q91Y11 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha9Q91Y11 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Pcdha9Q91Y11 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms