Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
Pcdhb20Q91XZ9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb20Q91XZ9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdhb20Q91XZ9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.93■□□□□ 0.46
Pcdhb20Q91XZ9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb20Q91XZ9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb20Q91XZ9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb20Q91XZ9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.92■□□□□ 0.46
Pcdhb20Q91XZ9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.92■□□□□ 0.46
Pcdhb20Q91XZ9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb20Q91XZ9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb20Q91XZ9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Pcdhb20Q91XZ9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb20Q91XZ9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb20Q91XZ9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb20Q91XZ9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.92■□□□□ 0.46
Pcdhb20Q91XZ9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdhb20Q91XZ9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb20Q91XZ9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb20Q91XZ9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb20Q91XZ9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb20Q91XZ9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb20Q91XZ9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.91■□□□□ 0.46
Pcdhb20Q91XZ9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.91■□□□□ 0.46
Pcdhb20Q91XZ9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Pcdhb20Q91XZ9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb20Q91XZ9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdhb20Q91XZ9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb20Q91XZ9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb20Q91XZ9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb20Q91XZ9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb20Q91XZ9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Pcdhb20Q91XZ9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.9■□□□□ 0.46
Pcdhb20Q91XZ9 Gm20614-201ENSMUST00000177106 632 ntBASIC17.9■□□□□ 0.46
Pcdhb20Q91XZ9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Pcdhb20Q91XZ9 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.9■□□□□ 0.46
Pcdhb20Q91XZ9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Pcdhb20Q91XZ9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb20Q91XZ9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Pcdhb20Q91XZ9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb20Q91XZ9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb20Q91XZ9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Pcdhb20Q91XZ9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdhb20Q91XZ9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb20Q91XZ9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb20Q91XZ9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Pcdhb20Q91XZ9 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb20Q91XZ9 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb20Q91XZ9 Gm5408-201ENSMUST00000197998 747 ntBASIC17.89■□□□□ 0.45
Pcdhb20Q91XZ9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb20Q91XZ9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb20Q91XZ9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Pcdhb20Q91XZ9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb20Q91XZ9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Pcdhb20Q91XZ9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb20Q91XZ9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb20Q91XZ9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb20Q91XZ9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb20Q91XZ9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdhb20Q91XZ9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb20Q91XZ9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Pcdhb20Q91XZ9 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdhb20Q91XZ9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb20Q91XZ9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.88■□□□□ 0.45
Pcdhb20Q91XZ9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb20Q91XZ9 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb20Q91XZ9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdhb20Q91XZ9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb20Q91XZ9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb20Q91XZ9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb20Q91XZ9 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb20Q91XZ9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb20Q91XZ9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb20Q91XZ9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdhb20Q91XZ9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb20Q91XZ9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb20Q91XZ9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Pcdhb20Q91XZ9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb20Q91XZ9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb20Q91XZ9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Pcdhb20Q91XZ9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb20Q91XZ9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Pcdhb20Q91XZ9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb20Q91XZ9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb20Q91XZ9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb20Q91XZ9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb20Q91XZ9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb20Q91XZ9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb20Q91XZ9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Pcdhb20Q91XZ9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb20Q91XZ9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Pcdhb20Q91XZ9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Pcdhb20Q91XZ9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb20Q91XZ9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb20Q91XZ9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb20Q91XZ9 Gm12441-201ENSMUST00000121806 588 ntBASIC17.86■□□□□ 0.45
Pcdhb20Q91XZ9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb20Q91XZ9 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pcdhb20Q91XZ9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.86■□□□□ 0.45
Pcdhb20Q91XZ9 Gm4968-201ENSMUST00000071458 858 ntBASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms