Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb3Q91XZ7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Pcdhb3Q91XZ7 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdhb3Q91XZ7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb3Q91XZ7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb3Q91XZ7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb3Q91XZ7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb3Q91XZ7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Pcdhb3Q91XZ7 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.58■□□□□ 0.56
Pcdhb3Q91XZ7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb3Q91XZ7 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.58■□□□□ 0.56
Pcdhb3Q91XZ7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb3Q91XZ7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb3Q91XZ7 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb3Q91XZ7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdhb3Q91XZ7 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb3Q91XZ7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb3Q91XZ7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb3Q91XZ7 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.57■□□□□ 0.56
Pcdhb3Q91XZ7 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb3Q91XZ7 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb3Q91XZ7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb3Q91XZ7 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Pcdhb3Q91XZ7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb3Q91XZ7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb3Q91XZ7 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb3Q91XZ7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.57■□□□□ 0.56
Pcdhb3Q91XZ7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.57■□□□□ 0.56
Pcdhb3Q91XZ7 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb3Q91XZ7 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb3Q91XZ7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb3Q91XZ7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb3Q91XZ7 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb3Q91XZ7 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb3Q91XZ7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Pcdhb3Q91XZ7 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdhb3Q91XZ7 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb3Q91XZ7 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb3Q91XZ7 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Pcdhb3Q91XZ7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb3Q91XZ7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Pcdhb3Q91XZ7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Pcdhb3Q91XZ7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb3Q91XZ7 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.56■□□□□ 0.56
Pcdhb3Q91XZ7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcdhb3Q91XZ7 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb3Q91XZ7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb3Q91XZ7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcdhb3Q91XZ7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb3Q91XZ7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb3Q91XZ7 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb3Q91XZ7 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhb3Q91XZ7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcdhb3Q91XZ7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb3Q91XZ7 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb3Q91XZ7 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb3Q91XZ7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb3Q91XZ7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb3Q91XZ7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Pcdhb3Q91XZ7 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb3Q91XZ7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb3Q91XZ7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhb3Q91XZ7 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb3Q91XZ7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb3Q91XZ7 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcdhb3Q91XZ7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb3Q91XZ7 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb3Q91XZ7 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Pcdhb3Q91XZ7 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb3Q91XZ7 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Pcdhb3Q91XZ7 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb3Q91XZ7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb3Q91XZ7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb3Q91XZ7 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhb3Q91XZ7 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb3Q91XZ7 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb3Q91XZ7 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb3Q91XZ7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb3Q91XZ7 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.53■□□□□ 0.56
Pcdhb3Q91XZ7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb3Q91XZ7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb3Q91XZ7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Pcdhb3Q91XZ7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.53■□□□□ 0.56
Pcdhb3Q91XZ7 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Pcdhb3Q91XZ7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.53■□□□□ 0.56
Pcdhb3Q91XZ7 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.53■□□□□ 0.56
Pcdhb3Q91XZ7 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb3Q91XZ7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb3Q91XZ7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb3Q91XZ7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb3Q91XZ7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb3Q91XZ7 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhb3Q91XZ7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.52■□□□□ 0.56
Pcdhb3Q91XZ7 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb3Q91XZ7 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.52■□□□□ 0.56
Pcdhb3Q91XZ7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb3Q91XZ7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Pcdhb3Q91XZ7 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhb3Q91XZ7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.52■□□□□ 0.56
Pcdhb3Q91XZ7 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms