Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb6Q91XZ4 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.24■□□□□ 0.67
Pcdhb6Q91XZ4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.24■□□□□ 0.67
Pcdhb6Q91XZ4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.24■□□□□ 0.67
Pcdhb6Q91XZ4 Gm42778-201ENSMUST00000199644 553 ntBASIC19.24■□□□□ 0.67
Pcdhb6Q91XZ4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb6Q91XZ4 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb6Q91XZ4 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb6Q91XZ4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb6Q91XZ4 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb6Q91XZ4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb6Q91XZ4 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb6Q91XZ4 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhb6Q91XZ4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb6Q91XZ4 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Pcdhb6Q91XZ4 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.23■□□□□ 0.67
Pcdhb6Q91XZ4 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb6Q91XZ4 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb6Q91XZ4 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.23■□□□□ 0.67
Pcdhb6Q91XZ4 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.23■□□□□ 0.67
Pcdhb6Q91XZ4 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.23■□□□□ 0.67
Pcdhb6Q91XZ4 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Pcdhb6Q91XZ4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb6Q91XZ4 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb6Q91XZ4 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb6Q91XZ4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pcdhb6Q91XZ4 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.22■□□□□ 0.67
Pcdhb6Q91XZ4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb6Q91XZ4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Pcdhb6Q91XZ4 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.21■□□□□ 0.67
Pcdhb6Q91XZ4 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb6Q91XZ4 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb6Q91XZ4 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb6Q91XZ4 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb6Q91XZ4 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.21■□□□□ 0.67
Pcdhb6Q91XZ4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Pcdhb6Q91XZ4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb6Q91XZ4 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.2■□□□□ 0.66
Pcdhb6Q91XZ4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb6Q91XZ4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb6Q91XZ4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb6Q91XZ4 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb6Q91XZ4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.2■□□□□ 0.66
Pcdhb6Q91XZ4 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb6Q91XZ4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb6Q91XZ4 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb6Q91XZ4 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhb6Q91XZ4 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.2■□□□□ 0.66
Pcdhb6Q91XZ4 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhb6Q91XZ4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb6Q91XZ4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Pcdhb6Q91XZ4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb6Q91XZ4 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb6Q91XZ4 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb6Q91XZ4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb6Q91XZ4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Pcdhb6Q91XZ4 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb6Q91XZ4 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb6Q91XZ4 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Pcdhb6Q91XZ4 Gm5874-201ENSMUST00000096101 508 ntBASIC19.19■□□□□ 0.66
Pcdhb6Q91XZ4 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb6Q91XZ4 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb6Q91XZ4 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb6Q91XZ4 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb6Q91XZ4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Pcdhb6Q91XZ4 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb6Q91XZ4 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb6Q91XZ4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb6Q91XZ4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb6Q91XZ4 Gm42642-201ENSMUST00000200683 355 ntBASIC19.18■□□□□ 0.66
Pcdhb6Q91XZ4 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.18■□□□□ 0.66
Pcdhb6Q91XZ4 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb6Q91XZ4 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb6Q91XZ4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb6Q91XZ4 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb6Q91XZ4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Pcdhb6Q91XZ4 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb6Q91XZ4 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb6Q91XZ4 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb6Q91XZ4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdhb6Q91XZ4 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhb6Q91XZ4 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb6Q91XZ4 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdhb6Q91XZ4 Gm18284-201ENSMUST00000172604 624 ntBASIC19.17■□□□□ 0.66
Pcdhb6Q91XZ4 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.17■□□□□ 0.66
Pcdhb6Q91XZ4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb6Q91XZ4 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb6Q91XZ4 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.17■□□□□ 0.66
Pcdhb6Q91XZ4 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb6Q91XZ4 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb6Q91XZ4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.16■□□□□ 0.66
Pcdhb6Q91XZ4 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb6Q91XZ4 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.16■□□□□ 0.66
Pcdhb6Q91XZ4 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb6Q91XZ4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.16■□□□□ 0.66
Pcdhb6Q91XZ4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.16■□□□□ 0.66
Pcdhb6Q91XZ4 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb6Q91XZ4 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb6Q91XZ4 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb6Q91XZ4 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms