Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Pcdhga4Q91XY4 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga4Q91XY4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhga4Q91XY4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
Pcdhga4Q91XY4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhga4Q91XY4 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga4Q91XY4 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga4Q91XY4 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga4Q91XY4 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga4Q91XY4 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga4Q91XY4 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga4Q91XY4 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga4Q91XY4 Gm37179-201ENSMUST00000194862 823 ntBASIC18.29■□□□□ 0.52
Pcdhga4Q91XY4 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.29■□□□□ 0.52
Pcdhga4Q91XY4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.29■□□□□ 0.52
Pcdhga4Q91XY4 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.29■□□□□ 0.52
Pcdhga4Q91XY4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga4Q91XY4 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga4Q91XY4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga4Q91XY4 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga4Q91XY4 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga4Q91XY4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga4Q91XY4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhga4Q91XY4 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga4Q91XY4 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhga4Q91XY4 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga4Q91XY4 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga4Q91XY4 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga4Q91XY4 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga4Q91XY4 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga4Q91XY4 Gm7860-201ENSMUST00000121190 879 ntBASIC18.28■□□□□ 0.52
Pcdhga4Q91XY4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga4Q91XY4 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga4Q91XY4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Pcdhga4Q91XY4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga4Q91XY4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Pcdhga4Q91XY4 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga4Q91XY4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.28■□□□□ 0.52
Pcdhga4Q91XY4 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhga4Q91XY4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga4Q91XY4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga4Q91XY4 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga4Q91XY4 Gm38205-201ENSMUST00000192243 258 ntBASIC18.27■□□□□ 0.52
Pcdhga4Q91XY4 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.27■□□□□ 0.52
Pcdhga4Q91XY4 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.27■□□□□ 0.52
Pcdhga4Q91XY4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhga4Q91XY4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga4Q91XY4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Pcdhga4Q91XY4 Gm12933-201ENSMUST00000120203 872 ntBASIC18.26■□□□□ 0.51
Pcdhga4Q91XY4 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.26■□□□□ 0.51
Pcdhga4Q91XY4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.26■□□□□ 0.51
Pcdhga4Q91XY4 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga4Q91XY4 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga4Q91XY4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhga4Q91XY4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga4Q91XY4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhga4Q91XY4 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga4Q91XY4 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhga4Q91XY4 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhga4Q91XY4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
Pcdhga4Q91XY4 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhga4Q91XY4 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga4Q91XY4 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga4Q91XY4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.25■□□□□ 0.51
Pcdhga4Q91XY4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Pcdhga4Q91XY4 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga4Q91XY4 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga4Q91XY4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga4Q91XY4 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga4Q91XY4 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga4Q91XY4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga4Q91XY4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga4Q91XY4 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdhga4Q91XY4 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga4Q91XY4 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga4Q91XY4 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga4Q91XY4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga4Q91XY4 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga4Q91XY4 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga4Q91XY4 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.24■□□□□ 0.51
Pcdhga4Q91XY4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga4Q91XY4 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Pcdhga4Q91XY4 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga4Q91XY4 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga4Q91XY4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Pcdhga4Q91XY4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga4Q91XY4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga4Q91XY4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdhga4Q91XY4 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Pcdhga4Q91XY4 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Pcdhga4Q91XY4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga4Q91XY4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga4Q91XY4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.23■□□□□ 0.51
Pcdhga4Q91XY4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga4Q91XY4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhga4Q91XY4 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.23■□□□□ 0.51
Pcdhga4Q91XY4 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga4Q91XY4 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga4Q91XY4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhga4Q91XY4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms