Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhgc5Q91XW9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhgc5Q91XW9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhgc5Q91XW9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhgc5Q91XW9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhgc5Q91XW9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhgc5Q91XW9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhgc5Q91XW9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.25■□□□□ 0.99
Pcdhgc5Q91XW9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.25■□□□□ 0.99
Pcdhgc5Q91XW9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Pcdhgc5Q91XW9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhgc5Q91XW9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.25■□□□□ 0.99
Pcdhgc5Q91XW9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhgc5Q91XW9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhgc5Q91XW9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhgc5Q91XW9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhgc5Q91XW9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhgc5Q91XW9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhgc5Q91XW9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.24■□□□□ 0.99
Pcdhgc5Q91XW9 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.24■□□□□ 0.99
Pcdhgc5Q91XW9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhgc5Q91XW9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC21.24■□□□□ 0.99
Pcdhgc5Q91XW9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Pcdhgc5Q91XW9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.24■□□□□ 0.99
Pcdhgc5Q91XW9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.24■□□□□ 0.99
Pcdhgc5Q91XW9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
Pcdhgc5Q91XW9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhgc5Q91XW9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhgc5Q91XW9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhgc5Q91XW9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Pcdhgc5Q91XW9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhgc5Q91XW9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhgc5Q91XW9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Pcdhgc5Q91XW9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhgc5Q91XW9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhgc5Q91XW9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhgc5Q91XW9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhgc5Q91XW9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhgc5Q91XW9 Gm7977-201ENSMUST00000193787 748 ntBASIC21.23■□□□□ 0.99
Pcdhgc5Q91XW9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Pcdhgc5Q91XW9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC21.23■□□□□ 0.99
Pcdhgc5Q91XW9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.23■□□□□ 0.99
Pcdhgc5Q91XW9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhgc5Q91XW9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgc5Q91XW9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgc5Q91XW9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgc5Q91XW9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Pcdhgc5Q91XW9 Gm42900-201ENSMUST00000197184 2167 ntBASIC21.22■□□□□ 0.99
Pcdhgc5Q91XW9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgc5Q91XW9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgc5Q91XW9 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.22■□□□□ 0.99
Pcdhgc5Q91XW9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgc5Q91XW9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgc5Q91XW9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgc5Q91XW9 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.22■□□□□ 0.99
Pcdhgc5Q91XW9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgc5Q91XW9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgc5Q91XW9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgc5Q91XW9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.22■□□□□ 0.99
Pcdhgc5Q91XW9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgc5Q91XW9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgc5Q91XW9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
Pcdhgc5Q91XW9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Pcdhgc5Q91XW9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.21■□□□□ 0.99
Pcdhgc5Q91XW9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhgc5Q91XW9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhgc5Q91XW9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Pcdhgc5Q91XW9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhgc5Q91XW9 Rab3c-203ENSMUST00000224180 967 ntBASIC21.21■□□□□ 0.99
Pcdhgc5Q91XW9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Pcdhgc5Q91XW9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
Pcdhgc5Q91XW9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.21■□□□□ 0.99
Pcdhgc5Q91XW9 AA386476-201ENSMUST00000098781 1665 ntBASIC21.21■□□□□ 0.99
Pcdhgc5Q91XW9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhgc5Q91XW9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhgc5Q91XW9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhgc5Q91XW9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC21.2■□□□□ 0.98
Pcdhgc5Q91XW9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhgc5Q91XW9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Pcdhgc5Q91XW9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Pcdhgc5Q91XW9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgc5Q91XW9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgc5Q91XW9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgc5Q91XW9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgc5Q91XW9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgc5Q91XW9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgc5Q91XW9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgc5Q91XW9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Pcdhgc5Q91XW9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgc5Q91XW9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Pcdhgc5Q91XW9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhgc5Q91XW9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhgc5Q91XW9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhgc5Q91XW9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhgc5Q91XW9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhgc5Q91XW9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Pcdhgc5Q91XW9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Pcdhgc5Q91XW9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhgc5Q91XW9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhgc5Q91XW9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms