Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lims2Q91XD2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lims2Q91XD2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lims2Q91XD2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.21■□□□□ 0.67
Lims2Q91XD2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.21■□□□□ 0.67
Lims2Q91XD2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lims2Q91XD2 Gm5408-201ENSMUST00000197998 747 ntBASIC19.21■□□□□ 0.67
Lims2Q91XD2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Lims2Q91XD2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.21■□□□□ 0.67
Lims2Q91XD2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lims2Q91XD2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Lims2Q91XD2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Lims2Q91XD2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lims2Q91XD2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lims2Q91XD2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lims2Q91XD2 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lims2Q91XD2 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.2■□□□□ 0.66
Lims2Q91XD2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lims2Q91XD2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lims2Q91XD2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Lims2Q91XD2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lims2Q91XD2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lims2Q91XD2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Lims2Q91XD2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Lims2Q91XD2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lims2Q91XD2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lims2Q91XD2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lims2Q91XD2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Lims2Q91XD2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.19■□□□□ 0.66
Lims2Q91XD2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lims2Q91XD2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.19■□□□□ 0.66
Lims2Q91XD2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lims2Q91XD2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lims2Q91XD2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lims2Q91XD2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lims2Q91XD2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Lims2Q91XD2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lims2Q91XD2 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.18■□□□□ 0.66
Lims2Q91XD2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lims2Q91XD2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lims2Q91XD2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Lims2Q91XD2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Lims2Q91XD2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Lims2Q91XD2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.17■□□□□ 0.66
Lims2Q91XD2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lims2Q91XD2 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Lims2Q91XD2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lims2Q91XD2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lims2Q91XD2 Gm12527-201ENSMUST00000117967 564 ntBASIC19.17■□□□□ 0.66
Lims2Q91XD2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.17■□□□□ 0.66
Lims2Q91XD2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.17■□□□□ 0.66
Lims2Q91XD2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lims2Q91XD2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lims2Q91XD2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lims2Q91XD2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Lims2Q91XD2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lims2Q91XD2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.16■□□□□ 0.66
Lims2Q91XD2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.16■□□□□ 0.66
Lims2Q91XD2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lims2Q91XD2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lims2Q91XD2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.16■□□□□ 0.66
Lims2Q91XD2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.16■□□□□ 0.66
Lims2Q91XD2 Gm22325-201ENSMUST00000158904 308 ntBASIC19.16■□□□□ 0.66
Lims2Q91XD2 Gm44549-201ENSMUST00000208351 577 ntBASIC19.16■□□□□ 0.66
Lims2Q91XD2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lims2Q91XD2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lims2Q91XD2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lims2Q91XD2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lims2Q91XD2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lims2Q91XD2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lims2Q91XD2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lims2Q91XD2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lims2Q91XD2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lims2Q91XD2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Lims2Q91XD2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Lims2Q91XD2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.15■□□□□ 0.66
Lims2Q91XD2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.15■□□□□ 0.66
Lims2Q91XD2 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.15■□□□□ 0.66
Lims2Q91XD2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lims2Q91XD2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Lims2Q91XD2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Lims2Q91XD2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.15■□□□□ 0.66
Lims2Q91XD2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lims2Q91XD2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Lims2Q91XD2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lims2Q91XD2 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.15■□□□□ 0.66
Lims2Q91XD2 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.15■□□□□ 0.66
Lims2Q91XD2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lims2Q91XD2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lims2Q91XD2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Lims2Q91XD2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.14■□□□□ 0.66
Lims2Q91XD2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lims2Q91XD2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lims2Q91XD2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lims2Q91XD2 Gm20049-201ENSMUST00000219950 730 ntBASIC19.14■□□□□ 0.65
Lims2Q91XD2 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.14■□□□□ 0.65
Lims2Q91XD2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lims2Q91XD2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lims2Q91XD2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Lims2Q91XD2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms