Protein–RNA interactions for Protein: Q91VA1

Slc44a4, Choline transporter-like protein 4, mousemouse

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a4Q91VA1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Slc44a4Q91VA1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Slc44a4Q91VA1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC22.12■■□□□ 1.13
Slc44a4Q91VA1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC22.12■■□□□ 1.13
Slc44a4Q91VA1 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Slc44a4Q91VA1 H2-K2-201ENSMUST00000174250 1049 ntBASIC22.12■■□□□ 1.13
Slc44a4Q91VA1 Gm9484-201ENSMUST00000195892 1159 ntBASIC22.12■■□□□ 1.13
Slc44a4Q91VA1 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Slc44a4Q91VA1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Slc44a4Q91VA1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Slc44a4Q91VA1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.11■■□□□ 1.13
Slc44a4Q91VA1 Gm13158-201ENSMUST00000122007 736 ntBASIC22.11■■□□□ 1.13
Slc44a4Q91VA1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Slc44a4Q91VA1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Slc44a4Q91VA1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Slc44a4Q91VA1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Slc44a4Q91VA1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Slc44a4Q91VA1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Slc44a4Q91VA1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC22.1■■□□□ 1.13
Slc44a4Q91VA1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Slc44a4Q91VA1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Slc44a4Q91VA1 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Slc44a4Q91VA1 Gm11927-201ENSMUST00000118472 759 ntBASIC22.1■■□□□ 1.13
Slc44a4Q91VA1 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC22.1■■□□□ 1.13
Slc44a4Q91VA1 Gm15378-201ENSMUST00000121894 207 ntBASIC22.1■■□□□ 1.13
Slc44a4Q91VA1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC22.1■■□□□ 1.13
Slc44a4Q91VA1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Slc44a4Q91VA1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Slc44a4Q91VA1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC22.1■■□□□ 1.13
Slc44a4Q91VA1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC22.1■■□□□ 1.13
Slc44a4Q91VA1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Slc44a4Q91VA1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Slc44a4Q91VA1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Slc44a4Q91VA1 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Slc44a4Q91VA1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Slc44a4Q91VA1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Slc44a4Q91VA1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Slc44a4Q91VA1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Slc44a4Q91VA1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Slc44a4Q91VA1 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Slc44a4Q91VA1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC22.09■■□□□ 1.13
Slc44a4Q91VA1 Gm22325-201ENSMUST00000158904 308 ntBASIC22.09■■□□□ 1.13
Slc44a4Q91VA1 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Slc44a4Q91VA1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Slc44a4Q91VA1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Slc44a4Q91VA1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Slc44a4Q91VA1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Slc44a4Q91VA1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Slc44a4Q91VA1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC22.08■■□□□ 1.13
Slc44a4Q91VA1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Slc44a4Q91VA1 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Slc44a4Q91VA1 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Slc44a4Q91VA1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Slc44a4Q91VA1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Slc44a4Q91VA1 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC22.08■■□□□ 1.13
Slc44a4Q91VA1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Slc44a4Q91VA1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Slc44a4Q91VA1 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Slc44a4Q91VA1 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC22.08■■□□□ 1.13
Slc44a4Q91VA1 Gm15565-201ENSMUST00000118890 427 ntBASIC22.08■■□□□ 1.13
Slc44a4Q91VA1 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC22.08■■□□□ 1.13
Slc44a4Q91VA1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
Slc44a4Q91VA1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Slc44a4Q91VA1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Slc44a4Q91VA1 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Slc44a4Q91VA1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Slc44a4Q91VA1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Slc44a4Q91VA1 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Slc44a4Q91VA1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Slc44a4Q91VA1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Slc44a4Q91VA1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Slc44a4Q91VA1 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Slc44a4Q91VA1 CT010444.2-201ENSMUST00000217877 1629 ntBASIC22.07■■□□□ 1.12
Slc44a4Q91VA1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Slc44a4Q91VA1 Gm7977-201ENSMUST00000193787 748 ntBASIC22.07■■□□□ 1.12
Slc44a4Q91VA1 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC22.07■■□□□ 1.12
Slc44a4Q91VA1 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Slc44a4Q91VA1 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Slc44a4Q91VA1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Slc44a4Q91VA1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
Slc44a4Q91VA1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Slc44a4Q91VA1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Slc44a4Q91VA1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Slc44a4Q91VA1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Slc44a4Q91VA1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC22.06■■□□□ 1.12
Slc44a4Q91VA1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Slc44a4Q91VA1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Slc44a4Q91VA1 Alkbh1-212ENSMUST00000185301 408 ntBASIC22.06■■□□□ 1.12
Slc44a4Q91VA1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC22.06■■□□□ 1.12
Slc44a4Q91VA1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Slc44a4Q91VA1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Slc44a4Q91VA1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC22.06■■□□□ 1.12
Slc44a4Q91VA1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Slc44a4Q91VA1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Slc44a4Q91VA1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Slc44a4Q91VA1 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Slc44a4Q91VA1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Slc44a4Q91VA1 Mir1199-201ENSMUST00000117015 119 ntBASIC22.05■■□□□ 1.12
Slc44a4Q91VA1 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Slc44a4Q91VA1 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC22.05■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms