Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TraipQ8VIG6 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TraipQ8VIG6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TraipQ8VIG6 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TraipQ8VIG6 Gm5643-201ENSMUST00000117081 966 ntBASIC19.91■□□□□ 0.78
TraipQ8VIG6 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.91■□□□□ 0.78
TraipQ8VIG6 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TraipQ8VIG6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
TraipQ8VIG6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TraipQ8VIG6 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TraipQ8VIG6 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TraipQ8VIG6 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TraipQ8VIG6 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TraipQ8VIG6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TraipQ8VIG6 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TraipQ8VIG6 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TraipQ8VIG6 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TraipQ8VIG6 Gm27275-201ENSMUST00000184318 272 ntBASIC19.9■□□□□ 0.78
TraipQ8VIG6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TraipQ8VIG6 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TraipQ8VIG6 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TraipQ8VIG6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TraipQ8VIG6 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TraipQ8VIG6 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
TraipQ8VIG6 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TraipQ8VIG6 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TraipQ8VIG6 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.89■□□□□ 0.77
TraipQ8VIG6 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TraipQ8VIG6 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.89■□□□□ 0.77
TraipQ8VIG6 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TraipQ8VIG6 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
TraipQ8VIG6 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.89■□□□□ 0.77
TraipQ8VIG6 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TraipQ8VIG6 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TraipQ8VIG6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TraipQ8VIG6 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TraipQ8VIG6 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TraipQ8VIG6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TraipQ8VIG6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TraipQ8VIG6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
TraipQ8VIG6 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TraipQ8VIG6 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TraipQ8VIG6 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TraipQ8VIG6 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.88■□□□□ 0.77
TraipQ8VIG6 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.88■□□□□ 0.77
TraipQ8VIG6 Gm22325-201ENSMUST00000158904 308 ntBASIC19.88■□□□□ 0.77
TraipQ8VIG6 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TraipQ8VIG6 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TraipQ8VIG6 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
TraipQ8VIG6 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TraipQ8VIG6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TraipQ8VIG6 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TraipQ8VIG6 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TraipQ8VIG6 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TraipQ8VIG6 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TraipQ8VIG6 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TraipQ8VIG6 Gm11249-201ENSMUST00000117071 859 ntBASIC19.87■□□□□ 0.77
TraipQ8VIG6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.87■□□□□ 0.77
TraipQ8VIG6 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.87■□□□□ 0.77
TraipQ8VIG6 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TraipQ8VIG6 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TraipQ8VIG6 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TraipQ8VIG6 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TraipQ8VIG6 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TraipQ8VIG6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
TraipQ8VIG6 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TraipQ8VIG6 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TraipQ8VIG6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
TraipQ8VIG6 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.86■□□□□ 0.77
TraipQ8VIG6 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TraipQ8VIG6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
TraipQ8VIG6 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TraipQ8VIG6 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TraipQ8VIG6 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TraipQ8VIG6 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
TraipQ8VIG6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TraipQ8VIG6 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TraipQ8VIG6 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TraipQ8VIG6 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TraipQ8VIG6 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TraipQ8VIG6 Gm18666-201ENSMUST00000190039 958 ntBASIC19.85■□□□□ 0.77
TraipQ8VIG6 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.85■□□□□ 0.77
TraipQ8VIG6 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TraipQ8VIG6 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TraipQ8VIG6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TraipQ8VIG6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
TraipQ8VIG6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TraipQ8VIG6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TraipQ8VIG6 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.84■□□□□ 0.77
TraipQ8VIG6 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TraipQ8VIG6 Gm2399-201ENSMUST00000104944 225 ntBASIC19.84■□□□□ 0.77
TraipQ8VIG6 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TraipQ8VIG6 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.84■□□□□ 0.77
TraipQ8VIG6 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.84■□□□□ 0.77
TraipQ8VIG6 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.84■□□□□ 0.77
TraipQ8VIG6 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.84■□□□□ 0.77
TraipQ8VIG6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TraipQ8VIG6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
TraipQ8VIG6 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TraipQ8VIG6 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms