Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Cspg4Q8VHY0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.12■□□□□ 0.17
Cspg4Q8VHY0 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.12■□□□□ 0.17
Cspg4Q8VHY0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cspg4Q8VHY0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC16.12■□□□□ 0.17
Cspg4Q8VHY0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cspg4Q8VHY0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cspg4Q8VHY0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cspg4Q8VHY0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cspg4Q8VHY0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cspg4Q8VHY0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cspg4Q8VHY0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Cspg4Q8VHY0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cspg4Q8VHY0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Cspg4Q8VHY0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cspg4Q8VHY0 Gm17641-201ENSMUST00000166328 2350 ntBASIC16.11■□□□□ 0.17
Cspg4Q8VHY0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cspg4Q8VHY0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.11■□□□□ 0.17
Cspg4Q8VHY0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cspg4Q8VHY0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cspg4Q8VHY0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cspg4Q8VHY0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cspg4Q8VHY0 Gm7889-201ENSMUST00000185591 958 ntBASIC16.11■□□□□ 0.17
Cspg4Q8VHY0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.11■□□□□ 0.17
Cspg4Q8VHY0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cspg4Q8VHY0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cspg4Q8VHY0 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cspg4Q8VHY0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cspg4Q8VHY0 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.1■□□□□ 0.17
Cspg4Q8VHY0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cspg4Q8VHY0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cspg4Q8VHY0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.1■□□□□ 0.17
Cspg4Q8VHY0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cspg4Q8VHY0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cspg4Q8VHY0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cspg4Q8VHY0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cspg4Q8VHY0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cspg4Q8VHY0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cspg4Q8VHY0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cspg4Q8VHY0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cspg4Q8VHY0 Gm10013-201ENSMUST00000106074 672 ntBASIC16.09■□□□□ 0.17
Cspg4Q8VHY0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cspg4Q8VHY0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cspg4Q8VHY0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Cspg4Q8VHY0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Cspg4Q8VHY0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cspg4Q8VHY0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cspg4Q8VHY0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Cspg4Q8VHY0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cspg4Q8VHY0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cspg4Q8VHY0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cspg4Q8VHY0 Dmtn-209ENSMUST00000228295 2572 ntBASIC16.08■□□□□ 0.17
Cspg4Q8VHY0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cspg4Q8VHY0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cspg4Q8VHY0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cspg4Q8VHY0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cspg4Q8VHY0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cspg4Q8VHY0 Gm13559-201ENSMUST00000120476 863 ntBASIC16.08■□□□□ 0.16
Cspg4Q8VHY0 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cspg4Q8VHY0 Gm33142-201ENSMUST00000193913 867 ntBASIC16.08■□□□□ 0.16
Cspg4Q8VHY0 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cspg4Q8VHY0 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cspg4Q8VHY0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cspg4Q8VHY0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cspg4Q8VHY0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cspg4Q8VHY0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.07■□□□□ 0.16
Cspg4Q8VHY0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.07■□□□□ 0.16
Cspg4Q8VHY0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cspg4Q8VHY0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cspg4Q8VHY0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cspg4Q8VHY0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cspg4Q8VHY0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cspg4Q8VHY0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cspg4Q8VHY0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cspg4Q8VHY0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cspg4Q8VHY0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cspg4Q8VHY0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.07■□□□□ 0.16
Cspg4Q8VHY0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cspg4Q8VHY0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cspg4Q8VHY0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cspg4Q8VHY0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cspg4Q8VHY0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cspg4Q8VHY0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cspg4Q8VHY0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cspg4Q8VHY0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cspg4Q8VHY0 Gm21814-202ENSMUST00000203277 873 ntBASIC16.06■□□□□ 0.16
Cspg4Q8VHY0 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.06■□□□□ 0.16
Cspg4Q8VHY0 Gm30025-201ENSMUST00000218555 728 ntBASIC16.06■□□□□ 0.16
Cspg4Q8VHY0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cspg4Q8VHY0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cspg4Q8VHY0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cspg4Q8VHY0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cspg4Q8VHY0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
Cspg4Q8VHY0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cspg4Q8VHY0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cspg4Q8VHY0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cspg4Q8VHY0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cspg4Q8VHY0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cspg4Q8VHY0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cspg4Q8VHY0 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms