Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh18Q8VHR0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh18Q8VHR0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh18Q8VHR0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh18Q8VHR0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh18Q8VHR0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh18Q8VHR0 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.91■□□□□ 0.46
Pcdh18Q8VHR0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.91■□□□□ 0.46
Pcdh18Q8VHR0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh18Q8VHR0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.91■□□□□ 0.46
Pcdh18Q8VHR0 Gm9847-201ENSMUST00000052528 599 ntBASIC17.91■□□□□ 0.46
Pcdh18Q8VHR0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh18Q8VHR0 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.91■□□□□ 0.46
Pcdh18Q8VHR0 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.91■□□□□ 0.46
Pcdh18Q8VHR0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh18Q8VHR0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh18Q8VHR0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh18Q8VHR0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh18Q8VHR0 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh18Q8VHR0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh18Q8VHR0 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh18Q8VHR0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh18Q8VHR0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh18Q8VHR0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Pcdh18Q8VHR0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh18Q8VHR0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh18Q8VHR0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh18Q8VHR0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh18Q8VHR0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh18Q8VHR0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh18Q8VHR0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh18Q8VHR0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Pcdh18Q8VHR0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Pcdh18Q8VHR0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
Pcdh18Q8VHR0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh18Q8VHR0 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdh18Q8VHR0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdh18Q8VHR0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh18Q8VHR0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh18Q8VHR0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh18Q8VHR0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh18Q8VHR0 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.89■□□□□ 0.45
Pcdh18Q8VHR0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh18Q8VHR0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh18Q8VHR0 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh18Q8VHR0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Pcdh18Q8VHR0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdh18Q8VHR0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh18Q8VHR0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh18Q8VHR0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh18Q8VHR0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh18Q8VHR0 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh18Q8VHR0 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh18Q8VHR0 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.88■□□□□ 0.45
Pcdh18Q8VHR0 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh18Q8VHR0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh18Q8VHR0 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.88■□□□□ 0.45
Pcdh18Q8VHR0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh18Q8VHR0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdh18Q8VHR0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh18Q8VHR0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Pcdh18Q8VHR0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh18Q8VHR0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh18Q8VHR0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh18Q8VHR0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcdh18Q8VHR0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh18Q8VHR0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh18Q8VHR0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh18Q8VHR0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh18Q8VHR0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh18Q8VHR0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh18Q8VHR0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Pcdh18Q8VHR0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh18Q8VHR0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh18Q8VHR0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh18Q8VHR0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Pcdh18Q8VHR0 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.87■□□□□ 0.45
Pcdh18Q8VHR0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh18Q8VHR0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh18Q8VHR0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh18Q8VHR0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh18Q8VHR0 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh18Q8VHR0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh18Q8VHR0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Pcdh18Q8VHR0 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh18Q8VHR0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh18Q8VHR0 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh18Q8VHR0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh18Q8VHR0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh18Q8VHR0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Pcdh18Q8VHR0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdh18Q8VHR0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Pcdh18Q8VHR0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh18Q8VHR0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Pcdh18Q8VHR0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh18Q8VHR0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh18Q8VHR0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh18Q8VHR0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh18Q8VHR0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdh18Q8VHR0 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms