Protein–RNA interactions for Protein: Q8VEK3

Hnrnpu, Heterogeneous nuclear ribonucleoprotein U, mousemouse

Known RBP Predictions only

Length 800 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HnrnpuQ8VEK3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC23.28■■□□□ 1.32
HnrnpuQ8VEK3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
HnrnpuQ8VEK3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
HnrnpuQ8VEK3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
HnrnpuQ8VEK3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HnrnpuQ8VEK3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HnrnpuQ8VEK3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HnrnpuQ8VEK3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HnrnpuQ8VEK3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
HnrnpuQ8VEK3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
HnrnpuQ8VEK3 AC099934.2-201ENSMUST00000196389 70 ntBASIC23.27■■□□□ 1.32
HnrnpuQ8VEK3 AC156953.1-201ENSMUST00000196953 70 ntBASIC23.27■■□□□ 1.32
HnrnpuQ8VEK3 AC157822.2-201ENSMUST00000200291 70 ntBASIC23.27■■□□□ 1.32
HnrnpuQ8VEK3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
HnrnpuQ8VEK3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HnrnpuQ8VEK3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HnrnpuQ8VEK3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC23.27■■□□□ 1.32
HnrnpuQ8VEK3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HnrnpuQ8VEK3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC23.26■■□□□ 1.31
HnrnpuQ8VEK3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HnrnpuQ8VEK3 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HnrnpuQ8VEK3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HnrnpuQ8VEK3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HnrnpuQ8VEK3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC23.26■■□□□ 1.31
HnrnpuQ8VEK3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC23.26■■□□□ 1.31
HnrnpuQ8VEK3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC23.26■■□□□ 1.31
HnrnpuQ8VEK3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HnrnpuQ8VEK3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
HnrnpuQ8VEK3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
HnrnpuQ8VEK3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HnrnpuQ8VEK3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
HnrnpuQ8VEK3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HnrnpuQ8VEK3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HnrnpuQ8VEK3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
HnrnpuQ8VEK3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
HnrnpuQ8VEK3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC23.25■■□□□ 1.31
HnrnpuQ8VEK3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
HnrnpuQ8VEK3 Gm7856-201ENSMUST00000117514 1493 ntBASIC23.25■■□□□ 1.31
HnrnpuQ8VEK3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HnrnpuQ8VEK3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
HnrnpuQ8VEK3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
HnrnpuQ8VEK3 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HnrnpuQ8VEK3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HnrnpuQ8VEK3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
HnrnpuQ8VEK3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HnrnpuQ8VEK3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
HnrnpuQ8VEK3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC23.25■■□□□ 1.31
HnrnpuQ8VEK3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HnrnpuQ8VEK3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
HnrnpuQ8VEK3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
HnrnpuQ8VEK3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HnrnpuQ8VEK3 Gm13534-201ENSMUST00000121169 513 ntBASIC23.24■■□□□ 1.31
HnrnpuQ8VEK3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
HnrnpuQ8VEK3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
HnrnpuQ8VEK3 Gm5112-201ENSMUST00000204407 2368 ntBASIC23.24■■□□□ 1.31
HnrnpuQ8VEK3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC23.24■■□□□ 1.31
HnrnpuQ8VEK3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC23.24■■□□□ 1.31
HnrnpuQ8VEK3 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HnrnpuQ8VEK3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HnrnpuQ8VEK3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
HnrnpuQ8VEK3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HnrnpuQ8VEK3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HnrnpuQ8VEK3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
HnrnpuQ8VEK3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HnrnpuQ8VEK3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HnrnpuQ8VEK3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HnrnpuQ8VEK3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC23.23■■□□□ 1.31
HnrnpuQ8VEK3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HnrnpuQ8VEK3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
HnrnpuQ8VEK3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC23.22■■□□□ 1.31
HnrnpuQ8VEK3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
HnrnpuQ8VEK3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
HnrnpuQ8VEK3 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HnrnpuQ8VEK3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
HnrnpuQ8VEK3 Gm19094-201ENSMUST00000209791 1246 ntBASIC23.22■■□□□ 1.31
HnrnpuQ8VEK3 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HnrnpuQ8VEK3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
HnrnpuQ8VEK3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HnrnpuQ8VEK3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HnrnpuQ8VEK3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HnrnpuQ8VEK3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HnrnpuQ8VEK3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
HnrnpuQ8VEK3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HnrnpuQ8VEK3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
HnrnpuQ8VEK3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HnrnpuQ8VEK3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HnrnpuQ8VEK3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HnrnpuQ8VEK3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
HnrnpuQ8VEK3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HnrnpuQ8VEK3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
HnrnpuQ8VEK3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
HnrnpuQ8VEK3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC23.21■■□□□ 1.31
HnrnpuQ8VEK3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HnrnpuQ8VEK3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HnrnpuQ8VEK3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HnrnpuQ8VEK3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
HnrnpuQ8VEK3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HnrnpuQ8VEK3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
HnrnpuQ8VEK3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
HnrnpuQ8VEK3 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms