Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lmcd1Q8VEE1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lmcd1Q8VEE1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Lmcd1Q8VEE1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lmcd1Q8VEE1 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Lmcd1Q8VEE1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lmcd1Q8VEE1 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.95■□□□□ 0.78
Lmcd1Q8VEE1 Timm23-208ENSMUST00000226683 750 ntBASIC19.95■□□□□ 0.78
Lmcd1Q8VEE1 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lmcd1Q8VEE1 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lmcd1Q8VEE1 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lmcd1Q8VEE1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Lmcd1Q8VEE1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lmcd1Q8VEE1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Lmcd1Q8VEE1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Lmcd1Q8VEE1 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.95■□□□□ 0.78
Lmcd1Q8VEE1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lmcd1Q8VEE1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lmcd1Q8VEE1 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lmcd1Q8VEE1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lmcd1Q8VEE1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lmcd1Q8VEE1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.94■□□□□ 0.78
Lmcd1Q8VEE1 AA414768-201ENSMUST00000121924 1257 ntBASIC19.94■□□□□ 0.78
Lmcd1Q8VEE1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.94■□□□□ 0.78
Lmcd1Q8VEE1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Lmcd1Q8VEE1 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lmcd1Q8VEE1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lmcd1Q8VEE1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Lmcd1Q8VEE1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lmcd1Q8VEE1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lmcd1Q8VEE1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lmcd1Q8VEE1 Gm9103-201ENSMUST00000119371 405 ntBASIC19.93■□□□□ 0.78
Lmcd1Q8VEE1 Gm6345-202ENSMUST00000180900 204 ntBASIC19.93■□□□□ 0.78
Lmcd1Q8VEE1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lmcd1Q8VEE1 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lmcd1Q8VEE1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lmcd1Q8VEE1 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.92■□□□□ 0.78
Lmcd1Q8VEE1 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lmcd1Q8VEE1 Gm3375-201ENSMUST00000203929 796 ntBASIC19.92■□□□□ 0.78
Lmcd1Q8VEE1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lmcd1Q8VEE1 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
Lmcd1Q8VEE1 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lmcd1Q8VEE1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Lmcd1Q8VEE1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Lmcd1Q8VEE1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lmcd1Q8VEE1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lmcd1Q8VEE1 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Lmcd1Q8VEE1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lmcd1Q8VEE1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.91■□□□□ 0.78
Lmcd1Q8VEE1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Lmcd1Q8VEE1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lmcd1Q8VEE1 Gm10013-201ENSMUST00000106074 672 ntBASIC19.91■□□□□ 0.78
Lmcd1Q8VEE1 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lmcd1Q8VEE1 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Lmcd1Q8VEE1 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.91■□□□□ 0.78
Lmcd1Q8VEE1 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.91■□□□□ 0.78
Lmcd1Q8VEE1 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.91■□□□□ 0.78
Lmcd1Q8VEE1 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lmcd1Q8VEE1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lmcd1Q8VEE1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lmcd1Q8VEE1 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lmcd1Q8VEE1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lmcd1Q8VEE1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lmcd1Q8VEE1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lmcd1Q8VEE1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lmcd1Q8VEE1 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lmcd1Q8VEE1 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lmcd1Q8VEE1 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lmcd1Q8VEE1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lmcd1Q8VEE1 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Lmcd1Q8VEE1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lmcd1Q8VEE1 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.9■□□□□ 0.78
Lmcd1Q8VEE1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.9■□□□□ 0.78
Lmcd1Q8VEE1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lmcd1Q8VEE1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lmcd1Q8VEE1 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lmcd1Q8VEE1 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.89■□□□□ 0.77
Lmcd1Q8VEE1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lmcd1Q8VEE1 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC19.89■□□□□ 0.77
Lmcd1Q8VEE1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Lmcd1Q8VEE1 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.89■□□□□ 0.77
Lmcd1Q8VEE1 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lmcd1Q8VEE1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lmcd1Q8VEE1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lmcd1Q8VEE1 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
Lmcd1Q8VEE1 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.89■□□□□ 0.77
Lmcd1Q8VEE1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.88■□□□□ 0.77
Lmcd1Q8VEE1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lmcd1Q8VEE1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lmcd1Q8VEE1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.88■□□□□ 0.77
Lmcd1Q8VEE1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.88■□□□□ 0.77
Lmcd1Q8VEE1 Gm10138-203ENSMUST00000206952 366 ntBASIC19.88■□□□□ 0.77
Lmcd1Q8VEE1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lmcd1Q8VEE1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lmcd1Q8VEE1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lmcd1Q8VEE1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lmcd1Q8VEE1 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lmcd1Q8VEE1 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lmcd1Q8VEE1 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.87■□□□□ 0.77
Lmcd1Q8VEE1 Gm18959-201ENSMUST00000208954 655 ntBASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms