Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.58■□□□□ 0.41
Ndc1Q8VCB1 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ndc1Q8VCB1 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ndc1Q8VCB1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ndc1Q8VCB1 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ndc1Q8VCB1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ndc1Q8VCB1 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ndc1Q8VCB1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Ndc1Q8VCB1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.58■□□□□ 0.4
Ndc1Q8VCB1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ndc1Q8VCB1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
Ndc1Q8VCB1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ndc1Q8VCB1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ndc1Q8VCB1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ndc1Q8VCB1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ndc1Q8VCB1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ndc1Q8VCB1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndc1Q8VCB1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.57■□□□□ 0.4
Ndc1Q8VCB1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndc1Q8VCB1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndc1Q8VCB1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndc1Q8VCB1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndc1Q8VCB1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndc1Q8VCB1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndc1Q8VCB1 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ndc1Q8VCB1 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndc1Q8VCB1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.57■□□□□ 0.4
Ndc1Q8VCB1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndc1Q8VCB1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndc1Q8VCB1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndc1Q8VCB1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ndc1Q8VCB1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ndc1Q8VCB1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ndc1Q8VCB1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ndc1Q8VCB1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Ndc1Q8VCB1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ndc1Q8VCB1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ndc1Q8VCB1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ndc1Q8VCB1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ndc1Q8VCB1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ndc1Q8VCB1 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ndc1Q8VCB1 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.56■□□□□ 0.4
Ndc1Q8VCB1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ndc1Q8VCB1 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ndc1Q8VCB1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ndc1Q8VCB1 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ndc1Q8VCB1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ndc1Q8VCB1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ndc1Q8VCB1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ndc1Q8VCB1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ndc1Q8VCB1 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ndc1Q8VCB1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ndc1Q8VCB1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ndc1Q8VCB1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ndc1Q8VCB1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ndc1Q8VCB1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ndc1Q8VCB1 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ndc1Q8VCB1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ndc1Q8VCB1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ndc1Q8VCB1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ndc1Q8VCB1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
Ndc1Q8VCB1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.55■□□□□ 0.4
Ndc1Q8VCB1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ndc1Q8VCB1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ndc1Q8VCB1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.55■□□□□ 0.4
Ndc1Q8VCB1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ndc1Q8VCB1 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ndc1Q8VCB1 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ndc1Q8VCB1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ndc1Q8VCB1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ndc1Q8VCB1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ndc1Q8VCB1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ndc1Q8VCB1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ndc1Q8VCB1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ndc1Q8VCB1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.54■□□□□ 0.4
Ndc1Q8VCB1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ndc1Q8VCB1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ndc1Q8VCB1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ndc1Q8VCB1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ndc1Q8VCB1 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.54■□□□□ 0.4
Ndc1Q8VCB1 Gm10653-202ENSMUST00000139570 835 ntBASIC17.54■□□□□ 0.4
Ndc1Q8VCB1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.54■□□□□ 0.4
Ndc1Q8VCB1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ndc1Q8VCB1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ndc1Q8VCB1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ndc1Q8VCB1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ndc1Q8VCB1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ndc1Q8VCB1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ndc1Q8VCB1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ndc1Q8VCB1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ndc1Q8VCB1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ndc1Q8VCB1 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ndc1Q8VCB1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ndc1Q8VCB1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ndc1Q8VCB1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ndc1Q8VCB1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ndc1Q8VCB1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ndc1Q8VCB1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ndc1Q8VCB1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ndc1Q8VCB1 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms