Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Lsm1Q8VC85 Gm43017-201ENSMUST00000198296 752 ntBASIC17.9■□□□□ 0.46
Lsm1Q8VC85 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.9■□□□□ 0.46
Lsm1Q8VC85 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lsm1Q8VC85 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lsm1Q8VC85 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lsm1Q8VC85 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lsm1Q8VC85 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Lsm1Q8VC85 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Lsm1Q8VC85 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lsm1Q8VC85 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Lsm1Q8VC85 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Lsm1Q8VC85 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Lsm1Q8VC85 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Lsm1Q8VC85 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.89■□□□□ 0.45
Lsm1Q8VC85 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lsm1Q8VC85 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lsm1Q8VC85 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lsm1Q8VC85 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Lsm1Q8VC85 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.89■□□□□ 0.45
Lsm1Q8VC85 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lsm1Q8VC85 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Lsm1Q8VC85 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lsm1Q8VC85 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Lsm1Q8VC85 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lsm1Q8VC85 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Lsm1Q8VC85 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Lsm1Q8VC85 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Lsm1Q8VC85 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lsm1Q8VC85 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Lsm1Q8VC85 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Lsm1Q8VC85 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lsm1Q8VC85 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lsm1Q8VC85 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lsm1Q8VC85 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lsm1Q8VC85 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lsm1Q8VC85 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.88■□□□□ 0.45
Lsm1Q8VC85 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Lsm1Q8VC85 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lsm1Q8VC85 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lsm1Q8VC85 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lsm1Q8VC85 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Lsm1Q8VC85 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.87■□□□□ 0.45
Lsm1Q8VC85 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.87■□□□□ 0.45
Lsm1Q8VC85 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lsm1Q8VC85 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lsm1Q8VC85 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lsm1Q8VC85 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lsm1Q8VC85 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.87■□□□□ 0.45
Lsm1Q8VC85 Gm38205-201ENSMUST00000192243 258 ntBASIC17.87■□□□□ 0.45
Lsm1Q8VC85 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lsm1Q8VC85 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lsm1Q8VC85 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lsm1Q8VC85 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lsm1Q8VC85 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lsm1Q8VC85 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lsm1Q8VC85 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lsm1Q8VC85 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lsm1Q8VC85 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lsm1Q8VC85 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Lsm1Q8VC85 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Lsm1Q8VC85 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.86■□□□□ 0.45
Lsm1Q8VC85 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Lsm1Q8VC85 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Lsm1Q8VC85 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Lsm1Q8VC85 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Lsm1Q8VC85 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.86■□□□□ 0.45
Lsm1Q8VC85 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.86■□□□□ 0.45
Lsm1Q8VC85 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.86■□□□□ 0.45
Lsm1Q8VC85 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.85■□□□□ 0.45
Lsm1Q8VC85 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lsm1Q8VC85 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lsm1Q8VC85 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.85■□□□□ 0.45
Lsm1Q8VC85 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Lsm1Q8VC85 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Lsm1Q8VC85 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.85■□□□□ 0.45
Lsm1Q8VC85 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lsm1Q8VC85 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lsm1Q8VC85 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Lsm1Q8VC85 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lsm1Q8VC85 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Lsm1Q8VC85 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lsm1Q8VC85 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Lsm1Q8VC85 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.84■□□□□ 0.45
Lsm1Q8VC85 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm1Q8VC85 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm1Q8VC85 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm1Q8VC85 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm1Q8VC85 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm1Q8VC85 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm1Q8VC85 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm1Q8VC85 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.84■□□□□ 0.45
Lsm1Q8VC85 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm1Q8VC85 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm1Q8VC85 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Lsm1Q8VC85 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Lsm1Q8VC85 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm1Q8VC85 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lsm1Q8VC85 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Lsm1Q8VC85 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms