Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vps39Q8R5L3 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps39Q8R5L3 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
Vps39Q8R5L3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.72■□□□□ 0.59
Vps39Q8R5L3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps39Q8R5L3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vps39Q8R5L3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps39Q8R5L3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps39Q8R5L3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps39Q8R5L3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps39Q8R5L3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.71■□□□□ 0.59
Vps39Q8R5L3 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps39Q8R5L3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Vps39Q8R5L3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps39Q8R5L3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps39Q8R5L3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Vps39Q8R5L3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps39Q8R5L3 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps39Q8R5L3 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps39Q8R5L3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Vps39Q8R5L3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps39Q8R5L3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps39Q8R5L3 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.7■□□□□ 0.58
Vps39Q8R5L3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Vps39Q8R5L3 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps39Q8R5L3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Vps39Q8R5L3 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Vps39Q8R5L3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Vps39Q8R5L3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps39Q8R5L3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps39Q8R5L3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps39Q8R5L3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps39Q8R5L3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps39Q8R5L3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps39Q8R5L3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.7■□□□□ 0.58
Vps39Q8R5L3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Vps39Q8R5L3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps39Q8R5L3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps39Q8R5L3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps39Q8R5L3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.69■□□□□ 0.58
Vps39Q8R5L3 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.69■□□□□ 0.58
Vps39Q8R5L3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps39Q8R5L3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Vps39Q8R5L3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Vps39Q8R5L3 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.69■□□□□ 0.58
Vps39Q8R5L3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps39Q8R5L3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps39Q8R5L3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps39Q8R5L3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vps39Q8R5L3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps39Q8R5L3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vps39Q8R5L3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.68■□□□□ 0.58
Vps39Q8R5L3 Gm43060-201ENSMUST00000200621 289 ntBASIC18.68■□□□□ 0.58
Vps39Q8R5L3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps39Q8R5L3 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps39Q8R5L3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps39Q8R5L3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps39Q8R5L3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vps39Q8R5L3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vps39Q8R5L3 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps39Q8R5L3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps39Q8R5L3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps39Q8R5L3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vps39Q8R5L3 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.67■□□□□ 0.58
Vps39Q8R5L3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vps39Q8R5L3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.67■□□□□ 0.58
Vps39Q8R5L3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vps39Q8R5L3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps39Q8R5L3 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps39Q8R5L3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.67■□□□□ 0.58
Vps39Q8R5L3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vps39Q8R5L3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps39Q8R5L3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps39Q8R5L3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps39Q8R5L3 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps39Q8R5L3 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vps39Q8R5L3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps39Q8R5L3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps39Q8R5L3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps39Q8R5L3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vps39Q8R5L3 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps39Q8R5L3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vps39Q8R5L3 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vps39Q8R5L3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps39Q8R5L3 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.66■□□□□ 0.58
Vps39Q8R5L3 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps39Q8R5L3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps39Q8R5L3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps39Q8R5L3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps39Q8R5L3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vps39Q8R5L3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps39Q8R5L3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps39Q8R5L3 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.65■□□□□ 0.58
Vps39Q8R5L3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vps39Q8R5L3 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps39Q8R5L3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Vps39Q8R5L3 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps39Q8R5L3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps39Q8R5L3 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.65■□□□□ 0.58
Vps39Q8R5L3 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms