Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cuedc1Q8R3V6 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.87■□□□□ 0.29
Cuedc1Q8R3V6 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.87■□□□□ 0.29
Cuedc1Q8R3V6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cuedc1Q8R3V6 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cuedc1Q8R3V6 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cuedc1Q8R3V6 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cuedc1Q8R3V6 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cuedc1Q8R3V6 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cuedc1Q8R3V6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cuedc1Q8R3V6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Cuedc1Q8R3V6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cuedc1Q8R3V6 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cuedc1Q8R3V6 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cuedc1Q8R3V6 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cuedc1Q8R3V6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cuedc1Q8R3V6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cuedc1Q8R3V6 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.86■□□□□ 0.29
Cuedc1Q8R3V6 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cuedc1Q8R3V6 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cuedc1Q8R3V6 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cuedc1Q8R3V6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cuedc1Q8R3V6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cuedc1Q8R3V6 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cuedc1Q8R3V6 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.86■□□□□ 0.29
Cuedc1Q8R3V6 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cuedc1Q8R3V6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cuedc1Q8R3V6 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cuedc1Q8R3V6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cuedc1Q8R3V6 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Cuedc1Q8R3V6 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Cuedc1Q8R3V6 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cuedc1Q8R3V6 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cuedc1Q8R3V6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cuedc1Q8R3V6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cuedc1Q8R3V6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.85■□□□□ 0.29
Cuedc1Q8R3V6 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cuedc1Q8R3V6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cuedc1Q8R3V6 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.85■□□□□ 0.29
Cuedc1Q8R3V6 Gm13534-201ENSMUST00000121169 513 ntBASIC16.85■□□□□ 0.29
Cuedc1Q8R3V6 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.85■□□□□ 0.29
Cuedc1Q8R3V6 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.85■□□□□ 0.29
Cuedc1Q8R3V6 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.85■□□□□ 0.29
Cuedc1Q8R3V6 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.85■□□□□ 0.29
Cuedc1Q8R3V6 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cuedc1Q8R3V6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.85■□□□□ 0.29
Cuedc1Q8R3V6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cuedc1Q8R3V6 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cuedc1Q8R3V6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cuedc1Q8R3V6 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.85■□□□□ 0.29
Cuedc1Q8R3V6 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cuedc1Q8R3V6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cuedc1Q8R3V6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cuedc1Q8R3V6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cuedc1Q8R3V6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cuedc1Q8R3V6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.84■□□□□ 0.29
Cuedc1Q8R3V6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cuedc1Q8R3V6 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cuedc1Q8R3V6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.84■□□□□ 0.29
Cuedc1Q8R3V6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cuedc1Q8R3V6 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cuedc1Q8R3V6 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cuedc1Q8R3V6 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cuedc1Q8R3V6 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cuedc1Q8R3V6 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cuedc1Q8R3V6 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cuedc1Q8R3V6 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cuedc1Q8R3V6 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cuedc1Q8R3V6 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cuedc1Q8R3V6 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Cuedc1Q8R3V6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cuedc1Q8R3V6 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cuedc1Q8R3V6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cuedc1Q8R3V6 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Cuedc1Q8R3V6 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cuedc1Q8R3V6 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Cuedc1Q8R3V6 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cuedc1Q8R3V6 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cuedc1Q8R3V6 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cuedc1Q8R3V6 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.83■□□□□ 0.28
Cuedc1Q8R3V6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cuedc1Q8R3V6 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cuedc1Q8R3V6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.83■□□□□ 0.28
Cuedc1Q8R3V6 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cuedc1Q8R3V6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cuedc1Q8R3V6 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.83■□□□□ 0.28
Cuedc1Q8R3V6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cuedc1Q8R3V6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cuedc1Q8R3V6 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cuedc1Q8R3V6 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cuedc1Q8R3V6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.82■□□□□ 0.28
Cuedc1Q8R3V6 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cuedc1Q8R3V6 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cuedc1Q8R3V6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cuedc1Q8R3V6 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cuedc1Q8R3V6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cuedc1Q8R3V6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cuedc1Q8R3V6 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cuedc1Q8R3V6 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cuedc1Q8R3V6 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms