Protein–RNA interactions for Protein: Q8R2N0

Ccdc59, Thyroid transcription factor 1-associated protein 26, mousemouse

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc59Q8R2N0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc59Q8R2N0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Ccdc59Q8R2N0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc59Q8R2N0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc59Q8R2N0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
Ccdc59Q8R2N0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc59Q8R2N0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc59Q8R2N0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ccdc59Q8R2N0 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc59Q8R2N0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc59Q8R2N0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ccdc59Q8R2N0 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.67■□□□□ 0.42
Ccdc59Q8R2N0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc59Q8R2N0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc59Q8R2N0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ccdc59Q8R2N0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc59Q8R2N0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.66■□□□□ 0.42
Ccdc59Q8R2N0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ccdc59Q8R2N0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc59Q8R2N0 Serp2-204ENSMUST00000228055 705 ntBASIC17.66■□□□□ 0.42
Ccdc59Q8R2N0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc59Q8R2N0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc59Q8R2N0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc59Q8R2N0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc59Q8R2N0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc59Q8R2N0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc59Q8R2N0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.66■□□□□ 0.42
Ccdc59Q8R2N0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc59Q8R2N0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc59Q8R2N0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc59Q8R2N0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc59Q8R2N0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc59Q8R2N0 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc59Q8R2N0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc59Q8R2N0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc59Q8R2N0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc59Q8R2N0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc59Q8R2N0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Ccdc59Q8R2N0 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.65■□□□□ 0.42
Ccdc59Q8R2N0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.65■□□□□ 0.42
Ccdc59Q8R2N0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc59Q8R2N0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Ccdc59Q8R2N0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc59Q8R2N0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.65■□□□□ 0.42
Ccdc59Q8R2N0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.65■□□□□ 0.42
Ccdc59Q8R2N0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.65■□□□□ 0.42
Ccdc59Q8R2N0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ccdc59Q8R2N0 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.65■□□□□ 0.42
Ccdc59Q8R2N0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc59Q8R2N0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc59Q8R2N0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ccdc59Q8R2N0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Ccdc59Q8R2N0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ccdc59Q8R2N0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Ccdc59Q8R2N0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ccdc59Q8R2N0 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.64■□□□□ 0.42
Ccdc59Q8R2N0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.64■□□□□ 0.41
Ccdc59Q8R2N0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc59Q8R2N0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc59Q8R2N0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc59Q8R2N0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.64■□□□□ 0.41
Ccdc59Q8R2N0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Ccdc59Q8R2N0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Ccdc59Q8R2N0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.64■□□□□ 0.41
Ccdc59Q8R2N0 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc59Q8R2N0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc59Q8R2N0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc59Q8R2N0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc59Q8R2N0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc59Q8R2N0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc59Q8R2N0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc59Q8R2N0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc59Q8R2N0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc59Q8R2N0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc59Q8R2N0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ccdc59Q8R2N0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc59Q8R2N0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.63■□□□□ 0.41
Ccdc59Q8R2N0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.63■□□□□ 0.41
Ccdc59Q8R2N0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.63■□□□□ 0.41
Ccdc59Q8R2N0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc59Q8R2N0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ccdc59Q8R2N0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc59Q8R2N0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc59Q8R2N0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc59Q8R2N0 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ccdc59Q8R2N0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc59Q8R2N0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.63■□□□□ 0.41
Ccdc59Q8R2N0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc59Q8R2N0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ccdc59Q8R2N0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc59Q8R2N0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc59Q8R2N0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc59Q8R2N0 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.62■□□□□ 0.41
Ccdc59Q8R2N0 Mir7075-201ENSMUST00000184187 82 ntBASIC17.62■□□□□ 0.41
Ccdc59Q8R2N0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc59Q8R2N0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc59Q8R2N0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Ccdc59Q8R2N0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc59Q8R2N0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc59Q8R2N0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms