Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Atf7Q8R0S1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Atf7Q8R0S1 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Atf7Q8R0S1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC22.09■■□□□ 1.13
Atf7Q8R0S1 Gm19094-201ENSMUST00000209791 1246 ntBASIC22.09■■□□□ 1.13
Atf7Q8R0S1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Atf7Q8R0S1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Atf7Q8R0S1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Atf7Q8R0S1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Atf7Q8R0S1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Atf7Q8R0S1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Atf7Q8R0S1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
Atf7Q8R0S1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Atf7Q8R0S1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Atf7Q8R0S1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC22.08■■□□□ 1.13
Atf7Q8R0S1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Atf7Q8R0S1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Atf7Q8R0S1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Atf7Q8R0S1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Atf7Q8R0S1 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Atf7Q8R0S1 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Atf7Q8R0S1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Atf7Q8R0S1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Atf7Q8R0S1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Atf7Q8R0S1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Atf7Q8R0S1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Atf7Q8R0S1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Atf7Q8R0S1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
Atf7Q8R0S1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Atf7Q8R0S1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Atf7Q8R0S1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Atf7Q8R0S1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Atf7Q8R0S1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Atf7Q8R0S1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Atf7Q8R0S1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC22.06■■□□□ 1.12
Atf7Q8R0S1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Atf7Q8R0S1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Atf7Q8R0S1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC22.06■■□□□ 1.12
Atf7Q8R0S1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC22.06■■□□□ 1.12
Atf7Q8R0S1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Atf7Q8R0S1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Atf7Q8R0S1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Atf7Q8R0S1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Atf7Q8R0S1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Atf7Q8R0S1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Atf7Q8R0S1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Atf7Q8R0S1 Gm10167-201ENSMUST00000150411 1479 ntBASIC22.05■■□□□ 1.12
Atf7Q8R0S1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Atf7Q8R0S1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC22.05■■□□□ 1.12
Atf7Q8R0S1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Atf7Q8R0S1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
Atf7Q8R0S1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Atf7Q8R0S1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Atf7Q8R0S1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Atf7Q8R0S1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Atf7Q8R0S1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Atf7Q8R0S1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Atf7Q8R0S1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Atf7Q8R0S1 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Atf7Q8R0S1 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC22.04■■□□□ 1.12
Atf7Q8R0S1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Atf7Q8R0S1 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Atf7Q8R0S1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Atf7Q8R0S1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Atf7Q8R0S1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Atf7Q8R0S1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Atf7Q8R0S1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Atf7Q8R0S1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC22.03■■□□□ 1.12
Atf7Q8R0S1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Atf7Q8R0S1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC22.03■■□□□ 1.12
Atf7Q8R0S1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC22.03■■□□□ 1.12
Atf7Q8R0S1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Atf7Q8R0S1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Atf7Q8R0S1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Atf7Q8R0S1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Atf7Q8R0S1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Atf7Q8R0S1 Gm10033-202ENSMUST00000211874 928 ntBASIC22.02■■□□□ 1.12
Atf7Q8R0S1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Atf7Q8R0S1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC22.02■■□□□ 1.12
Atf7Q8R0S1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Atf7Q8R0S1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC22.02■■□□□ 1.11
Atf7Q8R0S1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Atf7Q8R0S1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Atf7Q8R0S1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Atf7Q8R0S1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Atf7Q8R0S1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Atf7Q8R0S1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Atf7Q8R0S1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Atf7Q8R0S1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Atf7Q8R0S1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Atf7Q8R0S1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Atf7Q8R0S1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Atf7Q8R0S1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Atf7Q8R0S1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Atf7Q8R0S1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC22■■□□□ 1.11
Atf7Q8R0S1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Atf7Q8R0S1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Atf7Q8R0S1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Atf7Q8R0S1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC22■■□□□ 1.11
Atf7Q8R0S1 Gm5874-201ENSMUST00000096101 508 ntBASIC22■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms