Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm42545-201ENSMUST00000202755 922 ntBASIC24.62■■□□□ 1.53
Ddx54Q8K4L0 Timm23-208ENSMUST00000226683 750 ntBASIC24.62■■□□□ 1.53
Ddx54Q8K4L0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ddx54Q8K4L0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Ddx54Q8K4L0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ddx54Q8K4L0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ddx54Q8K4L0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC24.61■■□□□ 1.53
Ddx54Q8K4L0 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Ddx54Q8K4L0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ddx54Q8K4L0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ddx54Q8K4L0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC24.61■■□□□ 1.53
Ddx54Q8K4L0 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC24.61■■□□□ 1.53
Ddx54Q8K4L0 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Ddx54Q8K4L0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ddx54Q8K4L0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC24.61■■□□□ 1.53
Ddx54Q8K4L0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC24.61■■□□□ 1.53
Ddx54Q8K4L0 Gm7712-202ENSMUST00000222331 1510 ntBASIC24.61■■□□□ 1.53
Ddx54Q8K4L0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ddx54Q8K4L0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ddx54Q8K4L0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ddx54Q8K4L0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
Ddx54Q8K4L0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ddx54Q8K4L0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC24.6■■□□□ 1.53
Ddx54Q8K4L0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ddx54Q8K4L0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Ddx54Q8K4L0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Ddx54Q8K4L0 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ddx54Q8K4L0 Gm18025-201ENSMUST00000221733 862 ntBASIC24.59■■□□□ 1.53
Ddx54Q8K4L0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ddx54Q8K4L0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ddx54Q8K4L0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Ddx54Q8K4L0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC24.59■■□□□ 1.53
Ddx54Q8K4L0 Gm32051-202ENSMUST00000197905 2385 ntBASIC24.59■■□□□ 1.53
Ddx54Q8K4L0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
Ddx54Q8K4L0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ddx54Q8K4L0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC24.59■■□□□ 1.53
Ddx54Q8K4L0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ddx54Q8K4L0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC24.59■■□□□ 1.53
Ddx54Q8K4L0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ddx54Q8K4L0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ddx54Q8K4L0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ddx54Q8K4L0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ddx54Q8K4L0 Ank2-226ENSMUST00000189368 339 ntBASIC24.58■■□□□ 1.53
Ddx54Q8K4L0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC24.58■■□□□ 1.53
Ddx54Q8K4L0 Gm18959-201ENSMUST00000208954 655 ntBASIC24.58■■□□□ 1.53
Ddx54Q8K4L0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ddx54Q8K4L0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ddx54Q8K4L0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ddx54Q8K4L0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Ddx54Q8K4L0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ddx54Q8K4L0 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC24.57■■□□□ 1.52
Ddx54Q8K4L0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ddx54Q8K4L0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ddx54Q8K4L0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ddx54Q8K4L0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Ddx54Q8K4L0 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Ddx54Q8K4L0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ddx54Q8K4L0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ddx54Q8K4L0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Ddx54Q8K4L0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Ddx54Q8K4L0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
Ddx54Q8K4L0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Ddx54Q8K4L0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ddx54Q8K4L0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ddx54Q8K4L0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ddx54Q8K4L0 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ddx54Q8K4L0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ddx54Q8K4L0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ddx54Q8K4L0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC24.55■■□□□ 1.52
Ddx54Q8K4L0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ddx54Q8K4L0 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Ddx54Q8K4L0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC24.55■■□□□ 1.52
Ddx54Q8K4L0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Ddx54Q8K4L0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC24.55■■□□□ 1.52
Ddx54Q8K4L0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Ddx54Q8K4L0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Ddx54Q8K4L0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Ddx54Q8K4L0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
Ddx54Q8K4L0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
Ddx54Q8K4L0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ddx54Q8K4L0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Ddx54Q8K4L0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ddx54Q8K4L0 Gm10138-203ENSMUST00000206952 366 ntBASIC24.54■■□□□ 1.52
Ddx54Q8K4L0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Ddx54Q8K4L0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
Ddx54Q8K4L0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ddx54Q8K4L0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
Ddx54Q8K4L0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Ddx54Q8K4L0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ddx54Q8K4L0 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ddx54Q8K4L0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ddx54Q8K4L0 Gm14859-201ENSMUST00000117752 357 ntBASIC24.53■■□□□ 1.52
Ddx54Q8K4L0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC24.53■■□□□ 1.52
Ddx54Q8K4L0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ddx54Q8K4L0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ddx54Q8K4L0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ddx54Q8K4L0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ddx54Q8K4L0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ddx54Q8K4L0 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ddx54Q8K4L0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms