Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.98■□□□□ 0.63
CopaQ8CIE6 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CopaQ8CIE6 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CopaQ8CIE6 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CopaQ8CIE6 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CopaQ8CIE6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CopaQ8CIE6 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.98■□□□□ 0.63
CopaQ8CIE6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CopaQ8CIE6 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CopaQ8CIE6 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CopaQ8CIE6 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CopaQ8CIE6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CopaQ8CIE6 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CopaQ8CIE6 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.97■□□□□ 0.63
CopaQ8CIE6 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CopaQ8CIE6 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CopaQ8CIE6 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.97■□□□□ 0.63
CopaQ8CIE6 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CopaQ8CIE6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CopaQ8CIE6 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CopaQ8CIE6 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CopaQ8CIE6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CopaQ8CIE6 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CopaQ8CIE6 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
CopaQ8CIE6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CopaQ8CIE6 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CopaQ8CIE6 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.96■□□□□ 0.63
CopaQ8CIE6 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.96■□□□□ 0.63
CopaQ8CIE6 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CopaQ8CIE6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CopaQ8CIE6 Gm13146-201ENSMUST00000118508 780 ntBASIC18.96■□□□□ 0.63
CopaQ8CIE6 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CopaQ8CIE6 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.96■□□□□ 0.63
CopaQ8CIE6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CopaQ8CIE6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CopaQ8CIE6 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CopaQ8CIE6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CopaQ8CIE6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CopaQ8CIE6 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CopaQ8CIE6 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.96■□□□□ 0.63
CopaQ8CIE6 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CopaQ8CIE6 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CopaQ8CIE6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CopaQ8CIE6 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
CopaQ8CIE6 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CopaQ8CIE6 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CopaQ8CIE6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CopaQ8CIE6 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CopaQ8CIE6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CopaQ8CIE6 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CopaQ8CIE6 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CopaQ8CIE6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CopaQ8CIE6 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CopaQ8CIE6 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CopaQ8CIE6 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CopaQ8CIE6 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CopaQ8CIE6 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CopaQ8CIE6 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CopaQ8CIE6 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CopaQ8CIE6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.94■□□□□ 0.62
CopaQ8CIE6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CopaQ8CIE6 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CopaQ8CIE6 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CopaQ8CIE6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.94■□□□□ 0.62
CopaQ8CIE6 Gm27011-201ENSMUST00000182352 972 ntBASIC18.94■□□□□ 0.62
CopaQ8CIE6 Gm38205-201ENSMUST00000192243 258 ntBASIC18.94■□□□□ 0.62
CopaQ8CIE6 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.94■□□□□ 0.62
CopaQ8CIE6 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CopaQ8CIE6 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.94■□□□□ 0.62
CopaQ8CIE6 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.94■□□□□ 0.62
CopaQ8CIE6 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CopaQ8CIE6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CopaQ8CIE6 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CopaQ8CIE6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CopaQ8CIE6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.93■□□□□ 0.62
CopaQ8CIE6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CopaQ8CIE6 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CopaQ8CIE6 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CopaQ8CIE6 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CopaQ8CIE6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CopaQ8CIE6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.93■□□□□ 0.62
CopaQ8CIE6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CopaQ8CIE6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CopaQ8CIE6 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CopaQ8CIE6 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.93■□□□□ 0.62
CopaQ8CIE6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.93■□□□□ 0.62
CopaQ8CIE6 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.93■□□□□ 0.62
CopaQ8CIE6 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
CopaQ8CIE6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CopaQ8CIE6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CopaQ8CIE6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CopaQ8CIE6 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CopaQ8CIE6 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CopaQ8CIE6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CopaQ8CIE6 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.92■□□□□ 0.62
CopaQ8CIE6 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CopaQ8CIE6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CopaQ8CIE6 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CopaQ8CIE6 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CopaQ8CIE6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms