Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Clip4Q8CI96 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Clip4Q8CI96 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Clip4Q8CI96 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.74■□□□□ 0.59
Clip4Q8CI96 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clip4Q8CI96 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.73■□□□□ 0.59
Clip4Q8CI96 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.73■□□□□ 0.59
Clip4Q8CI96 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.73■□□□□ 0.59
Clip4Q8CI96 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clip4Q8CI96 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clip4Q8CI96 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clip4Q8CI96 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clip4Q8CI96 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Clip4Q8CI96 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clip4Q8CI96 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clip4Q8CI96 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clip4Q8CI96 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clip4Q8CI96 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Clip4Q8CI96 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clip4Q8CI96 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Clip4Q8CI96 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clip4Q8CI96 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.72■□□□□ 0.59
Clip4Q8CI96 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Clip4Q8CI96 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Clip4Q8CI96 Gm26571-201ENSMUST00000181399 666 ntBASIC18.72■□□□□ 0.59
Clip4Q8CI96 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clip4Q8CI96 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clip4Q8CI96 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clip4Q8CI96 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Clip4Q8CI96 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Clip4Q8CI96 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Clip4Q8CI96 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Clip4Q8CI96 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clip4Q8CI96 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.71■□□□□ 0.59
Clip4Q8CI96 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.71■□□□□ 0.59
Clip4Q8CI96 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Clip4Q8CI96 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clip4Q8CI96 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.71■□□□□ 0.59
Clip4Q8CI96 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Clip4Q8CI96 BC021767-201ENSMUST00000126387 1716 ntBASIC18.71■□□□□ 0.59
Clip4Q8CI96 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.71■□□□□ 0.58
Clip4Q8CI96 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Clip4Q8CI96 Grk6-206ENSMUST00000224995 2971 ntBASIC18.7■□□□□ 0.58
Clip4Q8CI96 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clip4Q8CI96 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Clip4Q8CI96 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clip4Q8CI96 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clip4Q8CI96 Gm10033-202ENSMUST00000211874 928 ntBASIC18.7■□□□□ 0.58
Clip4Q8CI96 Gm18671-201ENSMUST00000214826 683 ntBASIC18.7■□□□□ 0.58
Clip4Q8CI96 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clip4Q8CI96 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clip4Q8CI96 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Clip4Q8CI96 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clip4Q8CI96 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Clip4Q8CI96 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clip4Q8CI96 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.7■□□□□ 0.58
Clip4Q8CI96 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clip4Q8CI96 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clip4Q8CI96 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Clip4Q8CI96 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Clip4Q8CI96 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.69■□□□□ 0.58
Clip4Q8CI96 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip4Q8CI96 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Clip4Q8CI96 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip4Q8CI96 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.69■□□□□ 0.58
Clip4Q8CI96 Gm42569-201ENSMUST00000200539 472 ntBASIC18.69■□□□□ 0.58
Clip4Q8CI96 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip4Q8CI96 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip4Q8CI96 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip4Q8CI96 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Clip4Q8CI96 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip4Q8CI96 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Clip4Q8CI96 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Clip4Q8CI96 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip4Q8CI96 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Clip4Q8CI96 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip4Q8CI96 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Clip4Q8CI96 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.68■□□□□ 0.58
Clip4Q8CI96 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip4Q8CI96 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Clip4Q8CI96 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Clip4Q8CI96 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Clip4Q8CI96 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.68■□□□□ 0.58
Clip4Q8CI96 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip4Q8CI96 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Clip4Q8CI96 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip4Q8CI96 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip4Q8CI96 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip4Q8CI96 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip4Q8CI96 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip4Q8CI96 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Clip4Q8CI96 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip4Q8CI96 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Clip4Q8CI96 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.68■□□□□ 0.58
Clip4Q8CI96 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Clip4Q8CI96 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Clip4Q8CI96 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clip4Q8CI96 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clip4Q8CI96 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clip4Q8CI96 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms