Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.2■□□□□ 0.34
Pdlim5Q8CI51 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim5Q8CI51 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.19■□□□□ 0.34
Pdlim5Q8CI51 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim5Q8CI51 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.19■□□□□ 0.34
Pdlim5Q8CI51 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.19■□□□□ 0.34
Pdlim5Q8CI51 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim5Q8CI51 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim5Q8CI51 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.19■□□□□ 0.34
Pdlim5Q8CI51 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim5Q8CI51 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim5Q8CI51 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim5Q8CI51 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim5Q8CI51 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.18■□□□□ 0.34
Pdlim5Q8CI51 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
Pdlim5Q8CI51 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim5Q8CI51 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim5Q8CI51 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim5Q8CI51 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim5Q8CI51 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim5Q8CI51 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.18■□□□□ 0.34
Pdlim5Q8CI51 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim5Q8CI51 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim5Q8CI51 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim5Q8CI51 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim5Q8CI51 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.18■□□□□ 0.34
Pdlim5Q8CI51 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim5Q8CI51 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.17■□□□□ 0.34
Pdlim5Q8CI51 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim5Q8CI51 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim5Q8CI51 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim5Q8CI51 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.17■□□□□ 0.34
Pdlim5Q8CI51 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim5Q8CI51 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim5Q8CI51 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim5Q8CI51 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim5Q8CI51 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim5Q8CI51 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim5Q8CI51 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim5Q8CI51 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim5Q8CI51 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim5Q8CI51 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pdlim5Q8CI51 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pdlim5Q8CI51 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pdlim5Q8CI51 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pdlim5Q8CI51 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pdlim5Q8CI51 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.16■□□□□ 0.34
Pdlim5Q8CI51 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pdlim5Q8CI51 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.16■□□□□ 0.34
Pdlim5Q8CI51 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.16■□□□□ 0.34
Pdlim5Q8CI51 Gm43060-201ENSMUST00000200621 289 ntBASIC17.16■□□□□ 0.34
Pdlim5Q8CI51 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.16■□□□□ 0.34
Pdlim5Q8CI51 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pdlim5Q8CI51 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.16■□□□□ 0.34
Pdlim5Q8CI51 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pdlim5Q8CI51 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pdlim5Q8CI51 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pdlim5Q8CI51 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pdlim5Q8CI51 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pdlim5Q8CI51 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.16■□□□□ 0.34
Pdlim5Q8CI51 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pdlim5Q8CI51 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pdlim5Q8CI51 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.16■□□□□ 0.34
Pdlim5Q8CI51 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdlim5Q8CI51 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pdlim5Q8CI51 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdlim5Q8CI51 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdlim5Q8CI51 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdlim5Q8CI51 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.15■□□□□ 0.34
Pdlim5Q8CI51 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.15■□□□□ 0.34
Pdlim5Q8CI51 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.15■□□□□ 0.34
Pdlim5Q8CI51 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pdlim5Q8CI51 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdlim5Q8CI51 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pdlim5Q8CI51 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pdlim5Q8CI51 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pdlim5Q8CI51 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pdlim5Q8CI51 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim5Q8CI51 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim5Q8CI51 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim5Q8CI51 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim5Q8CI51 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.14■□□□□ 0.33
Pdlim5Q8CI51 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.14■□□□□ 0.33
Pdlim5Q8CI51 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim5Q8CI51 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim5Q8CI51 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.14■□□□□ 0.33
Pdlim5Q8CI51 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim5Q8CI51 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim5Q8CI51 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.14■□□□□ 0.33
Pdlim5Q8CI51 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim5Q8CI51 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pdlim5Q8CI51 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pdlim5Q8CI51 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pdlim5Q8CI51 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.13■□□□□ 0.33
Pdlim5Q8CI51 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pdlim5Q8CI51 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pdlim5Q8CI51 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pdlim5Q8CI51 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pdlim5Q8CI51 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.13■□□□□ 0.33
Pdlim5Q8CI51 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms