Protein–RNA interactions for Protein: Q8CDT7

Cabcoco1, Ciliary-associated calcium-binding coiled-coil protein 1, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cabcoco1Q8CDT7 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cabcoco1Q8CDT7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cabcoco1Q8CDT7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cabcoco1Q8CDT7 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cabcoco1Q8CDT7 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cabcoco1Q8CDT7 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cabcoco1Q8CDT7 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.34■□□□□ 0.53
Cabcoco1Q8CDT7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cabcoco1Q8CDT7 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cabcoco1Q8CDT7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cabcoco1Q8CDT7 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cabcoco1Q8CDT7 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cabcoco1Q8CDT7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cabcoco1Q8CDT7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cabcoco1Q8CDT7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cabcoco1Q8CDT7 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cabcoco1Q8CDT7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cabcoco1Q8CDT7 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cabcoco1Q8CDT7 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.33■□□□□ 0.52
Cabcoco1Q8CDT7 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cabcoco1Q8CDT7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cabcoco1Q8CDT7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cabcoco1Q8CDT7 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.32■□□□□ 0.52
Cabcoco1Q8CDT7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cabcoco1Q8CDT7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cabcoco1Q8CDT7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cabcoco1Q8CDT7 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cabcoco1Q8CDT7 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cabcoco1Q8CDT7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cabcoco1Q8CDT7 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cabcoco1Q8CDT7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cabcoco1Q8CDT7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.32■□□□□ 0.52
Cabcoco1Q8CDT7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cabcoco1Q8CDT7 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.32■□□□□ 0.52
Cabcoco1Q8CDT7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cabcoco1Q8CDT7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cabcoco1Q8CDT7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cabcoco1Q8CDT7 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cabcoco1Q8CDT7 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cabcoco1Q8CDT7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.31■□□□□ 0.52
Cabcoco1Q8CDT7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Cabcoco1Q8CDT7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cabcoco1Q8CDT7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cabcoco1Q8CDT7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cabcoco1Q8CDT7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Cabcoco1Q8CDT7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cabcoco1Q8CDT7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
Cabcoco1Q8CDT7 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
Cabcoco1Q8CDT7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cabcoco1Q8CDT7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cabcoco1Q8CDT7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cabcoco1Q8CDT7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.31■□□□□ 0.52
Cabcoco1Q8CDT7 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cabcoco1Q8CDT7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.3■□□□□ 0.52
Cabcoco1Q8CDT7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cabcoco1Q8CDT7 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cabcoco1Q8CDT7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cabcoco1Q8CDT7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cabcoco1Q8CDT7 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cabcoco1Q8CDT7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.3■□□□□ 0.52
Cabcoco1Q8CDT7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cabcoco1Q8CDT7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.3■□□□□ 0.52
Cabcoco1Q8CDT7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cabcoco1Q8CDT7 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.3■□□□□ 0.52
Cabcoco1Q8CDT7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cabcoco1Q8CDT7 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cabcoco1Q8CDT7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cabcoco1Q8CDT7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cabcoco1Q8CDT7 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cabcoco1Q8CDT7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
Cabcoco1Q8CDT7 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Cabcoco1Q8CDT7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cabcoco1Q8CDT7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.29■□□□□ 0.52
Cabcoco1Q8CDT7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cabcoco1Q8CDT7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cabcoco1Q8CDT7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cabcoco1Q8CDT7 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cabcoco1Q8CDT7 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cabcoco1Q8CDT7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cabcoco1Q8CDT7 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cabcoco1Q8CDT7 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cabcoco1Q8CDT7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cabcoco1Q8CDT7 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cabcoco1Q8CDT7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cabcoco1Q8CDT7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.28■□□□□ 0.52
Cabcoco1Q8CDT7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.28■□□□□ 0.52
Cabcoco1Q8CDT7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cabcoco1Q8CDT7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Cabcoco1Q8CDT7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cabcoco1Q8CDT7 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Cabcoco1Q8CDT7 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cabcoco1Q8CDT7 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cabcoco1Q8CDT7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cabcoco1Q8CDT7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cabcoco1Q8CDT7 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cabcoco1Q8CDT7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cabcoco1Q8CDT7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cabcoco1Q8CDT7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cabcoco1Q8CDT7 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cabcoco1Q8CDT7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms