Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Vcpip1Q8CDG3 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
Vcpip1Q8CDG3 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.06■□□□□ 0.8
Vcpip1Q8CDG3 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.06■□□□□ 0.8
Vcpip1Q8CDG3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vcpip1Q8CDG3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vcpip1Q8CDG3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vcpip1Q8CDG3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vcpip1Q8CDG3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vcpip1Q8CDG3 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vcpip1Q8CDG3 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.05■□□□□ 0.8
Vcpip1Q8CDG3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vcpip1Q8CDG3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Vcpip1Q8CDG3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.05■□□□□ 0.8
Vcpip1Q8CDG3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vcpip1Q8CDG3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vcpip1Q8CDG3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Vcpip1Q8CDG3 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Vcpip1Q8CDG3 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vcpip1Q8CDG3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vcpip1Q8CDG3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Vcpip1Q8CDG3 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vcpip1Q8CDG3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vcpip1Q8CDG3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Vcpip1Q8CDG3 Gm5874-201ENSMUST00000096101 508 ntBASIC20.04■□□□□ 0.8
Vcpip1Q8CDG3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Vcpip1Q8CDG3 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vcpip1Q8CDG3 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vcpip1Q8CDG3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Vcpip1Q8CDG3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Vcpip1Q8CDG3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vcpip1Q8CDG3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vcpip1Q8CDG3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vcpip1Q8CDG3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.03■□□□□ 0.8
Vcpip1Q8CDG3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vcpip1Q8CDG3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vcpip1Q8CDG3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Vcpip1Q8CDG3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Vcpip1Q8CDG3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vcpip1Q8CDG3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Vcpip1Q8CDG3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Vcpip1Q8CDG3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vcpip1Q8CDG3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Vcpip1Q8CDG3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vcpip1Q8CDG3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vcpip1Q8CDG3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.02■□□□□ 0.8
Vcpip1Q8CDG3 Gm7860-201ENSMUST00000121190 879 ntBASIC20.02■□□□□ 0.8
Vcpip1Q8CDG3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.02■□□□□ 0.8
Vcpip1Q8CDG3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vcpip1Q8CDG3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vcpip1Q8CDG3 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vcpip1Q8CDG3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vcpip1Q8CDG3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vcpip1Q8CDG3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vcpip1Q8CDG3 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vcpip1Q8CDG3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vcpip1Q8CDG3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vcpip1Q8CDG3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vcpip1Q8CDG3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Vcpip1Q8CDG3 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.01■□□□□ 0.79
Vcpip1Q8CDG3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Vcpip1Q8CDG3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vcpip1Q8CDG3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.01■□□□□ 0.79
Vcpip1Q8CDG3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vcpip1Q8CDG3 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.01■□□□□ 0.79
Vcpip1Q8CDG3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vcpip1Q8CDG3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Vcpip1Q8CDG3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20■□□□□ 0.79
Vcpip1Q8CDG3 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Vcpip1Q8CDG3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20■□□□□ 0.79
Vcpip1Q8CDG3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Vcpip1Q8CDG3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Vcpip1Q8CDG3 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Vcpip1Q8CDG3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vcpip1Q8CDG3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vcpip1Q8CDG3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20■□□□□ 0.79
Vcpip1Q8CDG3 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vcpip1Q8CDG3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Vcpip1Q8CDG3 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Vcpip1Q8CDG3 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Vcpip1Q8CDG3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vcpip1Q8CDG3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vcpip1Q8CDG3 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vcpip1Q8CDG3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vcpip1Q8CDG3 Gm40848-201ENSMUST00000221998 324 ntBASIC19.99■□□□□ 0.79
Vcpip1Q8CDG3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vcpip1Q8CDG3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Vcpip1Q8CDG3 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.99■□□□□ 0.79
Vcpip1Q8CDG3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Vcpip1Q8CDG3 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vcpip1Q8CDG3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Vcpip1Q8CDG3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vcpip1Q8CDG3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Vcpip1Q8CDG3 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vcpip1Q8CDG3 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vcpip1Q8CDG3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vcpip1Q8CDG3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vcpip1Q8CDG3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Vcpip1Q8CDG3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vcpip1Q8CDG3 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms