Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.88■□□□□ 0.29
Col6a6Q8C6K9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a6Q8C6K9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a6Q8C6K9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a6Q8C6K9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Col6a6Q8C6K9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Col6a6Q8C6K9 Gm6659-201ENSMUST00000174752 547 ntBASIC16.88■□□□□ 0.29
Col6a6Q8C6K9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a6Q8C6K9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Col6a6Q8C6K9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col6a6Q8C6K9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Col6a6Q8C6K9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a6Q8C6K9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.87■□□□□ 0.29
Col6a6Q8C6K9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.87■□□□□ 0.29
Col6a6Q8C6K9 Gm5417-201ENSMUST00000079706 384 ntBASIC16.87■□□□□ 0.29
Col6a6Q8C6K9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.87■□□□□ 0.29
Col6a6Q8C6K9 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.87■□□□□ 0.29
Col6a6Q8C6K9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Col6a6Q8C6K9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a6Q8C6K9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Col6a6Q8C6K9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.87■□□□□ 0.29
Col6a6Q8C6K9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a6Q8C6K9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a6Q8C6K9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a6Q8C6K9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Col6a6Q8C6K9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a6Q8C6K9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a6Q8C6K9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a6Q8C6K9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a6Q8C6K9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a6Q8C6K9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col6a6Q8C6K9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col6a6Q8C6K9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col6a6Q8C6K9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col6a6Q8C6K9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.86■□□□□ 0.29
Col6a6Q8C6K9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.86■□□□□ 0.29
Col6a6Q8C6K9 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.86■□□□□ 0.29
Col6a6Q8C6K9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col6a6Q8C6K9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col6a6Q8C6K9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col6a6Q8C6K9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col6a6Q8C6K9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.86■□□□□ 0.29
Col6a6Q8C6K9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col6a6Q8C6K9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Col6a6Q8C6K9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Col6a6Q8C6K9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col6a6Q8C6K9 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col6a6Q8C6K9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col6a6Q8C6K9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col6a6Q8C6K9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.86■□□□□ 0.29
Col6a6Q8C6K9 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col6a6Q8C6K9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Col6a6Q8C6K9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.85■□□□□ 0.29
Col6a6Q8C6K9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col6a6Q8C6K9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col6a6Q8C6K9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col6a6Q8C6K9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.85■□□□□ 0.29
Col6a6Q8C6K9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col6a6Q8C6K9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.85■□□□□ 0.29
Col6a6Q8C6K9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Col6a6Q8C6K9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col6a6Q8C6K9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col6a6Q8C6K9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a6Q8C6K9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a6Q8C6K9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a6Q8C6K9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a6Q8C6K9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.84■□□□□ 0.29
Col6a6Q8C6K9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a6Q8C6K9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a6Q8C6K9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a6Q8C6K9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a6Q8C6K9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col6a6Q8C6K9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Col6a6Q8C6K9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Col6a6Q8C6K9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Col6a6Q8C6K9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.83■□□□□ 0.28
Col6a6Q8C6K9 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Col6a6Q8C6K9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col6a6Q8C6K9 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col6a6Q8C6K9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col6a6Q8C6K9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col6a6Q8C6K9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col6a6Q8C6K9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col6a6Q8C6K9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col6a6Q8C6K9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Col6a6Q8C6K9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col6a6Q8C6K9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Col6a6Q8C6K9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col6a6Q8C6K9 Gm21814-202ENSMUST00000203277 873 ntBASIC16.82■□□□□ 0.28
Col6a6Q8C6K9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col6a6Q8C6K9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col6a6Q8C6K9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.82■□□□□ 0.28
Col6a6Q8C6K9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col6a6Q8C6K9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.82■□□□□ 0.28
Col6a6Q8C6K9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col6a6Q8C6K9 Gm7367-201ENSMUST00000057611 492 ntBASIC16.82■□□□□ 0.28
Col6a6Q8C6K9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col6a6Q8C6K9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.82■□□□□ 0.28
Col6a6Q8C6K9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.81■□□□□ 0.28
Col6a6Q8C6K9 Gm18025-201ENSMUST00000221733 862 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms