Protein–RNA interactions for Protein: Q8C5U0

4933409G03Rik, RIKEN cDNA 4933409G03 gene, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933409G03RikQ8C5U0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.29■□□□□ 0.84
4933409G03RikQ8C5U0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
4933409G03RikQ8C5U0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
4933409G03RikQ8C5U0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
4933409G03RikQ8C5U0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
4933409G03RikQ8C5U0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
4933409G03RikQ8C5U0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
4933409G03RikQ8C5U0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
4933409G03RikQ8C5U0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
4933409G03RikQ8C5U0 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.28■□□□□ 0.84
4933409G03RikQ8C5U0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
4933409G03RikQ8C5U0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
4933409G03RikQ8C5U0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
4933409G03RikQ8C5U0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
4933409G03RikQ8C5U0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
4933409G03RikQ8C5U0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.28■□□□□ 0.84
4933409G03RikQ8C5U0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
4933409G03RikQ8C5U0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
4933409G03RikQ8C5U0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.28■□□□□ 0.84
4933409G03RikQ8C5U0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
4933409G03RikQ8C5U0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
4933409G03RikQ8C5U0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
4933409G03RikQ8C5U0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
4933409G03RikQ8C5U0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
4933409G03RikQ8C5U0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
4933409G03RikQ8C5U0 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
4933409G03RikQ8C5U0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
4933409G03RikQ8C5U0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.27■□□□□ 0.84
4933409G03RikQ8C5U0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
4933409G03RikQ8C5U0 Gm5643-201ENSMUST00000117081 966 ntBASIC20.27■□□□□ 0.84
4933409G03RikQ8C5U0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.27■□□□□ 0.84
4933409G03RikQ8C5U0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.27■□□□□ 0.84
4933409G03RikQ8C5U0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.27■□□□□ 0.84
4933409G03RikQ8C5U0 Gm10252-201ENSMUST00000209541 832 ntBASIC20.27■□□□□ 0.84
4933409G03RikQ8C5U0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
4933409G03RikQ8C5U0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
4933409G03RikQ8C5U0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
4933409G03RikQ8C5U0 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.27■□□□□ 0.83
4933409G03RikQ8C5U0 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.27■□□□□ 0.83
4933409G03RikQ8C5U0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
4933409G03RikQ8C5U0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
4933409G03RikQ8C5U0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
4933409G03RikQ8C5U0 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.26■□□□□ 0.83
4933409G03RikQ8C5U0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
4933409G03RikQ8C5U0 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
4933409G03RikQ8C5U0 Gm18666-201ENSMUST00000190039 958 ntBASIC20.26■□□□□ 0.83
4933409G03RikQ8C5U0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
4933409G03RikQ8C5U0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
4933409G03RikQ8C5U0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
4933409G03RikQ8C5U0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
4933409G03RikQ8C5U0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
4933409G03RikQ8C5U0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
4933409G03RikQ8C5U0 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
4933409G03RikQ8C5U0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
4933409G03RikQ8C5U0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
4933409G03RikQ8C5U0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
4933409G03RikQ8C5U0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
4933409G03RikQ8C5U0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.25■□□□□ 0.83
4933409G03RikQ8C5U0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
4933409G03RikQ8C5U0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
4933409G03RikQ8C5U0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
4933409G03RikQ8C5U0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.25■□□□□ 0.83
4933409G03RikQ8C5U0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
4933409G03RikQ8C5U0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.25■□□□□ 0.83
4933409G03RikQ8C5U0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
4933409G03RikQ8C5U0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
4933409G03RikQ8C5U0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
4933409G03RikQ8C5U0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
4933409G03RikQ8C5U0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
4933409G03RikQ8C5U0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
4933409G03RikQ8C5U0 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
4933409G03RikQ8C5U0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
4933409G03RikQ8C5U0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
4933409G03RikQ8C5U0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
4933409G03RikQ8C5U0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
4933409G03RikQ8C5U0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
4933409G03RikQ8C5U0 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
4933409G03RikQ8C5U0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
4933409G03RikQ8C5U0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
4933409G03RikQ8C5U0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
4933409G03RikQ8C5U0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
4933409G03RikQ8C5U0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
4933409G03RikQ8C5U0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
4933409G03RikQ8C5U0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
4933409G03RikQ8C5U0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
4933409G03RikQ8C5U0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
4933409G03RikQ8C5U0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
4933409G03RikQ8C5U0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.23■□□□□ 0.83
4933409G03RikQ8C5U0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
4933409G03RikQ8C5U0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
4933409G03RikQ8C5U0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
4933409G03RikQ8C5U0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
4933409G03RikQ8C5U0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
4933409G03RikQ8C5U0 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
4933409G03RikQ8C5U0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
4933409G03RikQ8C5U0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
4933409G03RikQ8C5U0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
4933409G03RikQ8C5U0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
4933409G03RikQ8C5U0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
4933409G03RikQ8C5U0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms