Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Cps1Q8C196 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Cps1Q8C196 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
Cps1Q8C196 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC25.5■■□□□ 1.67
Cps1Q8C196 Mtag2-201ENSMUST00000058665 714 ntBASIC25.49■■□□□ 1.67
Cps1Q8C196 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Cps1Q8C196 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Cps1Q8C196 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
Cps1Q8C196 Gm15375-201ENSMUST00000119510 849 ntBASIC25.48■■□□□ 1.67
Cps1Q8C196 AC107452.1-201ENSMUST00000227963 481 ntBASIC25.48■■□□□ 1.67
Cps1Q8C196 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC25.48■■□□□ 1.67
Cps1Q8C196 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Cps1Q8C196 Gm45560-201ENSMUST00000211492 1472 ntBASIC25.48■■□□□ 1.67
Cps1Q8C196 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
Cps1Q8C196 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Cps1Q8C196 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
Cps1Q8C196 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Cps1Q8C196 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Cps1Q8C196 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Cps1Q8C196 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Cps1Q8C196 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Cps1Q8C196 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Cps1Q8C196 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Cps1Q8C196 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Cps1Q8C196 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Cps1Q8C196 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC25.47■■□□□ 1.67
Cps1Q8C196 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Cps1Q8C196 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Cps1Q8C196 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC25.47■■□□□ 1.67
Cps1Q8C196 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Cps1Q8C196 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Cps1Q8C196 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC25.46■■□□□ 1.67
Cps1Q8C196 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
Cps1Q8C196 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC25.46■■□□□ 1.67
Cps1Q8C196 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Cps1Q8C196 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
Cps1Q8C196 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Cps1Q8C196 Gm43183-201ENSMUST00000200632 547 ntBASIC25.45■■□□□ 1.66
Cps1Q8C196 Gm10138-203ENSMUST00000206952 366 ntBASIC25.45■■□□□ 1.66
Cps1Q8C196 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Cps1Q8C196 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
Cps1Q8C196 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Cps1Q8C196 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Cps1Q8C196 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Cps1Q8C196 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
Cps1Q8C196 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC25.44■■□□□ 1.66
Cps1Q8C196 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Cps1Q8C196 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
Cps1Q8C196 Gm7889-201ENSMUST00000185591 958 ntBASIC25.44■■□□□ 1.66
Cps1Q8C196 Odf3b-204ENSMUST00000227834 930 ntBASIC25.44■■□□□ 1.66
Cps1Q8C196 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Cps1Q8C196 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Cps1Q8C196 Gm30025-201ENSMUST00000218555 728 ntBASIC25.43■■□□□ 1.66
Cps1Q8C196 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC25.43■■□□□ 1.66
Cps1Q8C196 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Cps1Q8C196 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Cps1Q8C196 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Cps1Q8C196 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Cps1Q8C196 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Cps1Q8C196 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Cps1Q8C196 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Cps1Q8C196 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
Cps1Q8C196 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
Cps1Q8C196 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC25.42■■□□□ 1.66
Cps1Q8C196 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
Cps1Q8C196 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Cps1Q8C196 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Cps1Q8C196 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Cps1Q8C196 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
Cps1Q8C196 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC25.42■■□□□ 1.66
Cps1Q8C196 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC25.42■■□□□ 1.66
Cps1Q8C196 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
Cps1Q8C196 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
Cps1Q8C196 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Cps1Q8C196 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Cps1Q8C196 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Cps1Q8C196 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Cps1Q8C196 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Cps1Q8C196 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC25.41■■□□□ 1.66
Cps1Q8C196 Gm11539-201ENSMUST00000119837 557 ntBASIC25.41■■□□□ 1.66
Cps1Q8C196 Gm13436-201ENSMUST00000120418 567 ntBASIC25.41■■□□□ 1.66
Cps1Q8C196 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Cps1Q8C196 Gm37292-201ENSMUST00000192062 758 ntBASIC25.41■■□□□ 1.66
Cps1Q8C196 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Cps1Q8C196 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Cps1Q8C196 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Cps1Q8C196 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Cps1Q8C196 Gm13559-201ENSMUST00000120476 863 ntBASIC25.4■■□□□ 1.66
Cps1Q8C196 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Cps1Q8C196 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
Cps1Q8C196 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Cps1Q8C196 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Cps1Q8C196 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
Cps1Q8C196 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Cps1Q8C196 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC25.39■■□□□ 1.66
Cps1Q8C196 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Cps1Q8C196 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Cps1Q8C196 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Cps1Q8C196 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Cps1Q8C196 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC25.38■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms