Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3rf3Q8C120 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3rf3Q8C120 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3rf3Q8C120 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.45■□□□□ 0.7
Sh3rf3Q8C120 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3rf3Q8C120 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.45■□□□□ 0.7
Sh3rf3Q8C120 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3rf3Q8C120 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3rf3Q8C120 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3rf3Q8C120 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3rf3Q8C120 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3rf3Q8C120 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3rf3Q8C120 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3rf3Q8C120 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.44■□□□□ 0.7
Sh3rf3Q8C120 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3rf3Q8C120 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Sh3rf3Q8C120 Gm13146-201ENSMUST00000118508 780 ntBASIC19.44■□□□□ 0.7
Sh3rf3Q8C120 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3rf3Q8C120 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3rf3Q8C120 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Sh3rf3Q8C120 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.44■□□□□ 0.7
Sh3rf3Q8C120 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Sh3rf3Q8C120 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Sh3rf3Q8C120 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3rf3Q8C120 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Sh3rf3Q8C120 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3rf3Q8C120 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3rf3Q8C120 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Sh3rf3Q8C120 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3rf3Q8C120 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3rf3Q8C120 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3rf3Q8C120 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.44■□□□□ 0.7
Sh3rf3Q8C120 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
Sh3rf3Q8C120 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Sh3rf3Q8C120 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3rf3Q8C120 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh3rf3Q8C120 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh3rf3Q8C120 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Sh3rf3Q8C120 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh3rf3Q8C120 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh3rf3Q8C120 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh3rf3Q8C120 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sh3rf3Q8C120 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.43■□□□□ 0.7
Sh3rf3Q8C120 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sh3rf3Q8C120 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.43■□□□□ 0.7
Sh3rf3Q8C120 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh3rf3Q8C120 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3rf3Q8C120 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3rf3Q8C120 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3rf3Q8C120 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3rf3Q8C120 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3rf3Q8C120 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3rf3Q8C120 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3rf3Q8C120 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3rf3Q8C120 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.42■□□□□ 0.7
Sh3rf3Q8C120 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.42■□□□□ 0.7
Sh3rf3Q8C120 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3rf3Q8C120 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3rf3Q8C120 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh3rf3Q8C120 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Sh3rf3Q8C120 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.41■□□□□ 0.7
Sh3rf3Q8C120 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3rf3Q8C120 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Sh3rf3Q8C120 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3rf3Q8C120 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3rf3Q8C120 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.41■□□□□ 0.7
Sh3rf3Q8C120 Gm5874-201ENSMUST00000096101 508 ntBASIC19.41■□□□□ 0.7
Sh3rf3Q8C120 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Sh3rf3Q8C120 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3rf3Q8C120 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3rf3Q8C120 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3rf3Q8C120 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3rf3Q8C120 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3rf3Q8C120 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3rf3Q8C120 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3rf3Q8C120 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3rf3Q8C120 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3rf3Q8C120 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3rf3Q8C120 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Sh3rf3Q8C120 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3rf3Q8C120 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.4■□□□□ 0.7
Sh3rf3Q8C120 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.4■□□□□ 0.7
Sh3rf3Q8C120 Gm42778-201ENSMUST00000199644 553 ntBASIC19.4■□□□□ 0.7
Sh3rf3Q8C120 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3rf3Q8C120 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3rf3Q8C120 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Sh3rf3Q8C120 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3rf3Q8C120 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3rf3Q8C120 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3rf3Q8C120 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3rf3Q8C120 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3rf3Q8C120 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Sh3rf3Q8C120 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Sh3rf3Q8C120 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.39■□□□□ 0.7
Sh3rf3Q8C120 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sh3rf3Q8C120 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sh3rf3Q8C120 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sh3rf3Q8C120 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3rf3Q8C120 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3rf3Q8C120 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms