Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trim35Q8C006 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Trim35Q8C006 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim35Q8C006 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim35Q8C006 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim35Q8C006 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim35Q8C006 Gm25653-201ENSMUST00000158473 138 ntBASIC19.03■□□□□ 0.64
Trim35Q8C006 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim35Q8C006 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Trim35Q8C006 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC19.03■□□□□ 0.64
Trim35Q8C006 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.03■□□□□ 0.64
Trim35Q8C006 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.03■□□□□ 0.64
Trim35Q8C006 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trim35Q8C006 Gm10493-201ENSMUST00000097270 612 ntBASIC19.03■□□□□ 0.64
Trim35Q8C006 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim35Q8C006 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trim35Q8C006 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim35Q8C006 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim35Q8C006 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim35Q8C006 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Trim35Q8C006 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Trim35Q8C006 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Trim35Q8C006 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim35Q8C006 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim35Q8C006 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim35Q8C006 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim35Q8C006 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Trim35Q8C006 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim35Q8C006 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim35Q8C006 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim35Q8C006 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim35Q8C006 Gm5874-201ENSMUST00000096101 508 ntBASIC19.02■□□□□ 0.64
Trim35Q8C006 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim35Q8C006 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trim35Q8C006 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trim35Q8C006 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim35Q8C006 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim35Q8C006 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Trim35Q8C006 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Trim35Q8C006 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Trim35Q8C006 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim35Q8C006 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Trim35Q8C006 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim35Q8C006 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Trim35Q8C006 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trim35Q8C006 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim35Q8C006 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trim35Q8C006 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim35Q8C006 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.01■□□□□ 0.63
Trim35Q8C006 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim35Q8C006 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trim35Q8C006 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.01■□□□□ 0.63
Trim35Q8C006 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trim35Q8C006 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Trim35Q8C006 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.01■□□□□ 0.63
Trim35Q8C006 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC19.01■□□□□ 0.63
Trim35Q8C006 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.01■□□□□ 0.63
Trim35Q8C006 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim35Q8C006 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Trim35Q8C006 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.01■□□□□ 0.63
Trim35Q8C006 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Trim35Q8C006 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim35Q8C006 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
Trim35Q8C006 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim35Q8C006 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trim35Q8C006 Fam105a-203ENSMUST00000226170 3043 ntBASIC19■□□□□ 0.63
Trim35Q8C006 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim35Q8C006 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Trim35Q8C006 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19■□□□□ 0.63
Trim35Q8C006 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19■□□□□ 0.63
Trim35Q8C006 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19■□□□□ 0.63
Trim35Q8C006 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19■□□□□ 0.63
Trim35Q8C006 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim35Q8C006 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Trim35Q8C006 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trim35Q8C006 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim35Q8C006 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Trim35Q8C006 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim35Q8C006 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trim35Q8C006 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim35Q8C006 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim35Q8C006 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Trim35Q8C006 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.99■□□□□ 0.63
Trim35Q8C006 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim35Q8C006 Gm14579-201ENSMUST00000117068 283 ntBASIC18.99■□□□□ 0.63
Trim35Q8C006 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.99■□□□□ 0.63
Trim35Q8C006 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim35Q8C006 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC18.99■□□□□ 0.63
Trim35Q8C006 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC18.99■□□□□ 0.63
Trim35Q8C006 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC18.99■□□□□ 0.63
Trim35Q8C006 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Trim35Q8C006 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim35Q8C006 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim35Q8C006 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trim35Q8C006 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Trim35Q8C006 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.98■□□□□ 0.63
Trim35Q8C006 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim35Q8C006 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim35Q8C006 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim35Q8C006 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms