Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SprnQ8BWU1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SprnQ8BWU1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SprnQ8BWU1 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SprnQ8BWU1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SprnQ8BWU1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SprnQ8BWU1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.51■□□□□ 0.23
SprnQ8BWU1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SprnQ8BWU1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SprnQ8BWU1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.51■□□□□ 0.23
SprnQ8BWU1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SprnQ8BWU1 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SprnQ8BWU1 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SprnQ8BWU1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SprnQ8BWU1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SprnQ8BWU1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SprnQ8BWU1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SprnQ8BWU1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SprnQ8BWU1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SprnQ8BWU1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.5■□□□□ 0.23
SprnQ8BWU1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SprnQ8BWU1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SprnQ8BWU1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SprnQ8BWU1 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SprnQ8BWU1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SprnQ8BWU1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SprnQ8BWU1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SprnQ8BWU1 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SprnQ8BWU1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SprnQ8BWU1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SprnQ8BWU1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SprnQ8BWU1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SprnQ8BWU1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SprnQ8BWU1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SprnQ8BWU1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SprnQ8BWU1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SprnQ8BWU1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SprnQ8BWU1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SprnQ8BWU1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SprnQ8BWU1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.49■□□□□ 0.23
SprnQ8BWU1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SprnQ8BWU1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
SprnQ8BWU1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SprnQ8BWU1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.49■□□□□ 0.23
SprnQ8BWU1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SprnQ8BWU1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SprnQ8BWU1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SprnQ8BWU1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SprnQ8BWU1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SprnQ8BWU1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SprnQ8BWU1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SprnQ8BWU1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SprnQ8BWU1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SprnQ8BWU1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SprnQ8BWU1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SprnQ8BWU1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SprnQ8BWU1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SprnQ8BWU1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.48■□□□□ 0.23
SprnQ8BWU1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.48■□□□□ 0.23
SprnQ8BWU1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SprnQ8BWU1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SprnQ8BWU1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SprnQ8BWU1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SprnQ8BWU1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SprnQ8BWU1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SprnQ8BWU1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SprnQ8BWU1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SprnQ8BWU1 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.47■□□□□ 0.23
SprnQ8BWU1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SprnQ8BWU1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SprnQ8BWU1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SprnQ8BWU1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SprnQ8BWU1 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.47■□□□□ 0.23
SprnQ8BWU1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
SprnQ8BWU1 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SprnQ8BWU1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SprnQ8BWU1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SprnQ8BWU1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SprnQ8BWU1 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.47■□□□□ 0.23
SprnQ8BWU1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SprnQ8BWU1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SprnQ8BWU1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SprnQ8BWU1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SprnQ8BWU1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SprnQ8BWU1 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
SprnQ8BWU1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SprnQ8BWU1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SprnQ8BWU1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SprnQ8BWU1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.46■□□□□ 0.23
SprnQ8BWU1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.46■□□□□ 0.23
SprnQ8BWU1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SprnQ8BWU1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SprnQ8BWU1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SprnQ8BWU1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.46■□□□□ 0.23
SprnQ8BWU1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SprnQ8BWU1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SprnQ8BWU1 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.46■□□□□ 0.23
SprnQ8BWU1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SprnQ8BWU1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
SprnQ8BWU1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms