Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Rd3Q8BRE0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rd3Q8BRE0 Gm5643-201ENSMUST00000117081 966 ntBASIC19.81■□□□□ 0.76
Rd3Q8BRE0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.81■□□□□ 0.76
Rd3Q8BRE0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Rd3Q8BRE0 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.81■□□□□ 0.76
Rd3Q8BRE0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rd3Q8BRE0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rd3Q8BRE0 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.81■□□□□ 0.76
Rd3Q8BRE0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.81■□□□□ 0.76
Rd3Q8BRE0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rd3Q8BRE0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rd3Q8BRE0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rd3Q8BRE0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rd3Q8BRE0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rd3Q8BRE0 Dio3-201ENSMUST00000097228 1449 ntBASIC19.8■□□□□ 0.76
Rd3Q8BRE0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rd3Q8BRE0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rd3Q8BRE0 Gm44549-201ENSMUST00000208351 577 ntBASIC19.8■□□□□ 0.76
Rd3Q8BRE0 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Rd3Q8BRE0 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rd3Q8BRE0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rd3Q8BRE0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rd3Q8BRE0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rd3Q8BRE0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rd3Q8BRE0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rd3Q8BRE0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.79■□□□□ 0.76
Rd3Q8BRE0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rd3Q8BRE0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rd3Q8BRE0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rd3Q8BRE0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rd3Q8BRE0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rd3Q8BRE0 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rd3Q8BRE0 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rd3Q8BRE0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Rd3Q8BRE0 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.79■□□□□ 0.76
Rd3Q8BRE0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rd3Q8BRE0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rd3Q8BRE0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rd3Q8BRE0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rd3Q8BRE0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rd3Q8BRE0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rd3Q8BRE0 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rd3Q8BRE0 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.79■□□□□ 0.76
Rd3Q8BRE0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rd3Q8BRE0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rd3Q8BRE0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rd3Q8BRE0 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rd3Q8BRE0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.78■□□□□ 0.76
Rd3Q8BRE0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rd3Q8BRE0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rd3Q8BRE0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rd3Q8BRE0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rd3Q8BRE0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Rd3Q8BRE0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rd3Q8BRE0 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.77■□□□□ 0.76
Rd3Q8BRE0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rd3Q8BRE0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.77■□□□□ 0.76
Rd3Q8BRE0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Rd3Q8BRE0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rd3Q8BRE0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rd3Q8BRE0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rd3Q8BRE0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.76■□□□□ 0.75
Rd3Q8BRE0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rd3Q8BRE0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.76■□□□□ 0.75
Rd3Q8BRE0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rd3Q8BRE0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rd3Q8BRE0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rd3Q8BRE0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rd3Q8BRE0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.76■□□□□ 0.75
Rd3Q8BRE0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.76■□□□□ 0.75
Rd3Q8BRE0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rd3Q8BRE0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Rd3Q8BRE0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rd3Q8BRE0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rd3Q8BRE0 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rd3Q8BRE0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rd3Q8BRE0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rd3Q8BRE0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.75■□□□□ 0.75
Rd3Q8BRE0 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.75■□□□□ 0.75
Rd3Q8BRE0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rd3Q8BRE0 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rd3Q8BRE0 Gm2399-201ENSMUST00000104944 225 ntBASIC19.75■□□□□ 0.75
Rd3Q8BRE0 Gm11249-201ENSMUST00000117071 859 ntBASIC19.75■□□□□ 0.75
Rd3Q8BRE0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Rd3Q8BRE0 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.75■□□□□ 0.75
Rd3Q8BRE0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rd3Q8BRE0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Rd3Q8BRE0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.75■□□□□ 0.75
Rd3Q8BRE0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rd3Q8BRE0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rd3Q8BRE0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rd3Q8BRE0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rd3Q8BRE0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
Rd3Q8BRE0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rd3Q8BRE0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.74■□□□□ 0.75
Rd3Q8BRE0 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.74■□□□□ 0.75
Rd3Q8BRE0 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.74■□□□□ 0.75
Rd3Q8BRE0 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.74■□□□□ 0.75
Rd3Q8BRE0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms