Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Suds3Q8BR65 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Suds3Q8BR65 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Suds3Q8BR65 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Suds3Q8BR65 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Suds3Q8BR65 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Suds3Q8BR65 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Suds3Q8BR65 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
Suds3Q8BR65 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Suds3Q8BR65 Gm18671-201ENSMUST00000214826 683 ntBASIC19.08■□□□□ 0.64
Suds3Q8BR65 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Suds3Q8BR65 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Suds3Q8BR65 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Suds3Q8BR65 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Suds3Q8BR65 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Suds3Q8BR65 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Suds3Q8BR65 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Suds3Q8BR65 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Suds3Q8BR65 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Suds3Q8BR65 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Suds3Q8BR65 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Suds3Q8BR65 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Suds3Q8BR65 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Suds3Q8BR65 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Suds3Q8BR65 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Suds3Q8BR65 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
Suds3Q8BR65 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Suds3Q8BR65 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.07■□□□□ 0.64
Suds3Q8BR65 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Suds3Q8BR65 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Suds3Q8BR65 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Suds3Q8BR65 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Suds3Q8BR65 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Suds3Q8BR65 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.07■□□□□ 0.64
Suds3Q8BR65 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Suds3Q8BR65 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Suds3Q8BR65 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Suds3Q8BR65 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
Suds3Q8BR65 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Suds3Q8BR65 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.06■□□□□ 0.64
Suds3Q8BR65 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Suds3Q8BR65 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Suds3Q8BR65 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Suds3Q8BR65 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Suds3Q8BR65 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Suds3Q8BR65 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Suds3Q8BR65 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Suds3Q8BR65 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Suds3Q8BR65 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Suds3Q8BR65 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Suds3Q8BR65 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Suds3Q8BR65 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.06■□□□□ 0.64
Suds3Q8BR65 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Suds3Q8BR65 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Suds3Q8BR65 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Suds3Q8BR65 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Suds3Q8BR65 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Suds3Q8BR65 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Suds3Q8BR65 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Suds3Q8BR65 Gm27801-201ENSMUST00000184174 223 ntBASIC19.05■□□□□ 0.64
Suds3Q8BR65 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Suds3Q8BR65 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Suds3Q8BR65 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Suds3Q8BR65 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.05■□□□□ 0.64
Suds3Q8BR65 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.05■□□□□ 0.64
Suds3Q8BR65 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Suds3Q8BR65 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Suds3Q8BR65 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Suds3Q8BR65 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Suds3Q8BR65 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Suds3Q8BR65 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Suds3Q8BR65 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Suds3Q8BR65 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.04■□□□□ 0.64
Suds3Q8BR65 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Suds3Q8BR65 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Suds3Q8BR65 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Suds3Q8BR65 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Suds3Q8BR65 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Suds3Q8BR65 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Suds3Q8BR65 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Suds3Q8BR65 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.03■□□□□ 0.64
Suds3Q8BR65 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Suds3Q8BR65 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.03■□□□□ 0.64
Suds3Q8BR65 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.03■□□□□ 0.64
Suds3Q8BR65 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Suds3Q8BR65 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Suds3Q8BR65 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Suds3Q8BR65 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Suds3Q8BR65 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Suds3Q8BR65 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
Suds3Q8BR65 Gm10849-201ENSMUST00000100397 618 ntBASIC19.02■□□□□ 0.64
Suds3Q8BR65 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Suds3Q8BR65 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Suds3Q8BR65 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.02■□□□□ 0.64
Suds3Q8BR65 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Suds3Q8BR65 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Suds3Q8BR65 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Suds3Q8BR65 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Suds3Q8BR65 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Suds3Q8BR65 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms