Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Col16a1Q8BLX7 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Col16a1Q8BLX7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
Col16a1Q8BLX7 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC24.84■■□□□ 1.57
Col16a1Q8BLX7 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC24.84■■□□□ 1.57
Col16a1Q8BLX7 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Col16a1Q8BLX7 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Col16a1Q8BLX7 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Col16a1Q8BLX7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
Col16a1Q8BLX7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
Col16a1Q8BLX7 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Col16a1Q8BLX7 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Col16a1Q8BLX7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
Col16a1Q8BLX7 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Col16a1Q8BLX7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Col16a1Q8BLX7 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Col16a1Q8BLX7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
Col16a1Q8BLX7 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Col16a1Q8BLX7 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
Col16a1Q8BLX7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Col16a1Q8BLX7 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Col16a1Q8BLX7 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Col16a1Q8BLX7 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Col16a1Q8BLX7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Col16a1Q8BLX7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Col16a1Q8BLX7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.56
Col16a1Q8BLX7 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Col16a1Q8BLX7 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Col16a1Q8BLX7 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
Col16a1Q8BLX7 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Col16a1Q8BLX7 Gm8309-201ENSMUST00000206627 1448 ntBASIC24.81■■□□□ 1.56
Col16a1Q8BLX7 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Col16a1Q8BLX7 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Col16a1Q8BLX7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Col16a1Q8BLX7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
Col16a1Q8BLX7 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Col16a1Q8BLX7 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Col16a1Q8BLX7 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Col16a1Q8BLX7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Col16a1Q8BLX7 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Col16a1Q8BLX7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Col16a1Q8BLX7 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
Col16a1Q8BLX7 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC24.8■■□□□ 1.56
Col16a1Q8BLX7 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Col16a1Q8BLX7 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
Col16a1Q8BLX7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Col16a1Q8BLX7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Col16a1Q8BLX7 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Col16a1Q8BLX7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Col16a1Q8BLX7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Col16a1Q8BLX7 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Col16a1Q8BLX7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Col16a1Q8BLX7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
Col16a1Q8BLX7 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC24.79■■□□□ 1.56
Col16a1Q8BLX7 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Col16a1Q8BLX7 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC24.79■■□□□ 1.56
Col16a1Q8BLX7 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Col16a1Q8BLX7 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Col16a1Q8BLX7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Col16a1Q8BLX7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Col16a1Q8BLX7 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Col16a1Q8BLX7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC24.78■■□□□ 1.56
Col16a1Q8BLX7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Col16a1Q8BLX7 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Col16a1Q8BLX7 Gm10819-201ENSMUST00000099988 561 ntBASIC24.78■■□□□ 1.56
Col16a1Q8BLX7 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Col16a1Q8BLX7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Col16a1Q8BLX7 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
Col16a1Q8BLX7 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Col16a1Q8BLX7 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC24.76■■□□□ 1.55
Col16a1Q8BLX7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Col16a1Q8BLX7 Gm34220-201ENSMUST00000223001 2709 ntBASIC24.76■■□□□ 1.55
Col16a1Q8BLX7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Col16a1Q8BLX7 Flg-201ENSMUST00000050758 1488 ntBASIC24.76■■□□□ 1.55
Col16a1Q8BLX7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC24.76■■□□□ 1.55
Col16a1Q8BLX7 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC24.76■■□□□ 1.55
Col16a1Q8BLX7 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Col16a1Q8BLX7 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
Col16a1Q8BLX7 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Col16a1Q8BLX7 AC126028.2-201ENSMUST00000228100 1833 ntBASIC24.75■■□□□ 1.55
Col16a1Q8BLX7 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Col16a1Q8BLX7 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Col16a1Q8BLX7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
Col16a1Q8BLX7 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Col16a1Q8BLX7 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Col16a1Q8BLX7 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
Col16a1Q8BLX7 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC24.75■■□□□ 1.55
Col16a1Q8BLX7 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC24.75■■□□□ 1.55
Col16a1Q8BLX7 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC24.75■■□□□ 1.55
Col16a1Q8BLX7 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC24.75■■□□□ 1.55
Col16a1Q8BLX7 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Col16a1Q8BLX7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC24.75■■□□□ 1.55
Col16a1Q8BLX7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Col16a1Q8BLX7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
Col16a1Q8BLX7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Col16a1Q8BLX7 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC24.74■■□□□ 1.55
Col16a1Q8BLX7 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Col16a1Q8BLX7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Col16a1Q8BLX7 Hsf1-207ENSMUST00000228371 2102 ntBASIC24.74■■□□□ 1.55
Col16a1Q8BLX7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms