Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trpa1Q8BLA8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trpa1Q8BLA8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Trpa1Q8BLA8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trpa1Q8BLA8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trpa1Q8BLA8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Trpa1Q8BLA8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Trpa1Q8BLA8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trpa1Q8BLA8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.54■□□□□ 0.72
Trpa1Q8BLA8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.54■□□□□ 0.72
Trpa1Q8BLA8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trpa1Q8BLA8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trpa1Q8BLA8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trpa1Q8BLA8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trpa1Q8BLA8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
Trpa1Q8BLA8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trpa1Q8BLA8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trpa1Q8BLA8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.53■□□□□ 0.72
Trpa1Q8BLA8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trpa1Q8BLA8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.53■□□□□ 0.72
Trpa1Q8BLA8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trpa1Q8BLA8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trpa1Q8BLA8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.53■□□□□ 0.72
Trpa1Q8BLA8 Gm37179-201ENSMUST00000194862 823 ntBASIC19.53■□□□□ 0.72
Trpa1Q8BLA8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.53■□□□□ 0.72
Trpa1Q8BLA8 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.53■□□□□ 0.72
Trpa1Q8BLA8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trpa1Q8BLA8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trpa1Q8BLA8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trpa1Q8BLA8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trpa1Q8BLA8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trpa1Q8BLA8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Trpa1Q8BLA8 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trpa1Q8BLA8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trpa1Q8BLA8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Trpa1Q8BLA8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.52■□□□□ 0.72
Trpa1Q8BLA8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trpa1Q8BLA8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trpa1Q8BLA8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.52■□□□□ 0.72
Trpa1Q8BLA8 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.52■□□□□ 0.72
Trpa1Q8BLA8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trpa1Q8BLA8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trpa1Q8BLA8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trpa1Q8BLA8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Trpa1Q8BLA8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trpa1Q8BLA8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trpa1Q8BLA8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trpa1Q8BLA8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Trpa1Q8BLA8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trpa1Q8BLA8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Trpa1Q8BLA8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Trpa1Q8BLA8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.51■□□□□ 0.71
Trpa1Q8BLA8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.51■□□□□ 0.71
Trpa1Q8BLA8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trpa1Q8BLA8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trpa1Q8BLA8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trpa1Q8BLA8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trpa1Q8BLA8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trpa1Q8BLA8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trpa1Q8BLA8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trpa1Q8BLA8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trpa1Q8BLA8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trpa1Q8BLA8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trpa1Q8BLA8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trpa1Q8BLA8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trpa1Q8BLA8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trpa1Q8BLA8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.5■□□□□ 0.71
Trpa1Q8BLA8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trpa1Q8BLA8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trpa1Q8BLA8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Trpa1Q8BLA8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trpa1Q8BLA8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trpa1Q8BLA8 Gm13534-201ENSMUST00000121169 513 ntBASIC19.49■□□□□ 0.71
Trpa1Q8BLA8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.49■□□□□ 0.71
Trpa1Q8BLA8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trpa1Q8BLA8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Trpa1Q8BLA8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trpa1Q8BLA8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trpa1Q8BLA8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trpa1Q8BLA8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trpa1Q8BLA8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trpa1Q8BLA8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Trpa1Q8BLA8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Trpa1Q8BLA8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trpa1Q8BLA8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Trpa1Q8BLA8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.48■□□□□ 0.71
Trpa1Q8BLA8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trpa1Q8BLA8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trpa1Q8BLA8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trpa1Q8BLA8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.48■□□□□ 0.71
Trpa1Q8BLA8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Trpa1Q8BLA8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trpa1Q8BLA8 Grk6-206ENSMUST00000224995 2971 ntBASIC19.48■□□□□ 0.71
Trpa1Q8BLA8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Trpa1Q8BLA8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.48■□□□□ 0.71
Trpa1Q8BLA8 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trpa1Q8BLA8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trpa1Q8BLA8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Trpa1Q8BLA8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.47■□□□□ 0.71
Trpa1Q8BLA8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms