Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.08■□□□□ 0.64
Chmp2bQ8BJF9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Chmp2bQ8BJF9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Chmp2bQ8BJF9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp2bQ8BJF9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Chmp2bQ8BJF9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.07■□□□□ 0.64
Chmp2bQ8BJF9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Chmp2bQ8BJF9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp2bQ8BJF9 Gm11421-201ENSMUST00000122124 294 ntBASIC19.07■□□□□ 0.64
Chmp2bQ8BJF9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.07■□□□□ 0.64
Chmp2bQ8BJF9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
Chmp2bQ8BJF9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp2bQ8BJF9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Chmp2bQ8BJF9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp2bQ8BJF9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp2bQ8BJF9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp2bQ8BJF9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chmp2bQ8BJF9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp2bQ8BJF9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.06■□□□□ 0.64
Chmp2bQ8BJF9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp2bQ8BJF9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Chmp2bQ8BJF9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.06■□□□□ 0.64
Chmp2bQ8BJF9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp2bQ8BJF9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp2bQ8BJF9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.06■□□□□ 0.64
Chmp2bQ8BJF9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
Chmp2bQ8BJF9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Chmp2bQ8BJF9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Chmp2bQ8BJF9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.06■□□□□ 0.64
Chmp2bQ8BJF9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.05■□□□□ 0.64
Chmp2bQ8BJF9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp2bQ8BJF9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp2bQ8BJF9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.05■□□□□ 0.64
Chmp2bQ8BJF9 Gm7860-201ENSMUST00000121190 879 ntBASIC19.05■□□□□ 0.64
Chmp2bQ8BJF9 Smad6-203ENSMUST00000179458 273 ntBASIC19.05■□□□□ 0.64
Chmp2bQ8BJF9 Mir7075-201ENSMUST00000184187 82 ntBASIC19.05■□□□□ 0.64
Chmp2bQ8BJF9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.05■□□□□ 0.64
Chmp2bQ8BJF9 Gm13241-201ENSMUST00000094493 780 ntBASIC19.05■□□□□ 0.64
Chmp2bQ8BJF9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp2bQ8BJF9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp2bQ8BJF9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Chmp2bQ8BJF9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp2bQ8BJF9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp2bQ8BJF9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp2bQ8BJF9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp2bQ8BJF9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp2bQ8BJF9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Chmp2bQ8BJF9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chmp2bQ8BJF9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp2bQ8BJF9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp2bQ8BJF9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.04■□□□□ 0.64
Chmp2bQ8BJF9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp2bQ8BJF9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.04■□□□□ 0.64
Chmp2bQ8BJF9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Chmp2bQ8BJF9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Chmp2bQ8BJF9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Chmp2bQ8BJF9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp2bQ8BJF9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp2bQ8BJF9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp2bQ8BJF9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp2bQ8BJF9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp2bQ8BJF9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chmp2bQ8BJF9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.03■□□□□ 0.64
Chmp2bQ8BJF9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp2bQ8BJF9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp2bQ8BJF9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp2bQ8BJF9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp2bQ8BJF9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Chmp2bQ8BJF9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp2bQ8BJF9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp2bQ8BJF9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp2bQ8BJF9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp2bQ8BJF9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp2bQ8BJF9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chmp2bQ8BJF9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
Chmp2bQ8BJF9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp2bQ8BJF9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp2bQ8BJF9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Chmp2bQ8BJF9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Chmp2bQ8BJF9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp2bQ8BJF9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp2bQ8BJF9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp2bQ8BJF9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp2bQ8BJF9 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.02■□□□□ 0.64
Chmp2bQ8BJF9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp2bQ8BJF9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp2bQ8BJF9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Chmp2bQ8BJF9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chmp2bQ8BJF9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Chmp2bQ8BJF9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Chmp2bQ8BJF9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp2bQ8BJF9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp2bQ8BJF9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp2bQ8BJF9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp2bQ8BJF9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp2bQ8BJF9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp2bQ8BJF9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp2bQ8BJF9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp2bQ8BJF9 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp2bQ8BJF9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms