Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Pcdh20Q8BIZ0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.17■□□□□ 0.5
Pcdh20Q8BIZ0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcdh20Q8BIZ0 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh20Q8BIZ0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Pcdh20Q8BIZ0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh20Q8BIZ0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh20Q8BIZ0 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.17■□□□□ 0.5
Pcdh20Q8BIZ0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh20Q8BIZ0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pcdh20Q8BIZ0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh20Q8BIZ0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcdh20Q8BIZ0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pcdh20Q8BIZ0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh20Q8BIZ0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh20Q8BIZ0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh20Q8BIZ0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh20Q8BIZ0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh20Q8BIZ0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh20Q8BIZ0 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh20Q8BIZ0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh20Q8BIZ0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcdh20Q8BIZ0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh20Q8BIZ0 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.16■□□□□ 0.5
Pcdh20Q8BIZ0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcdh20Q8BIZ0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.16■□□□□ 0.5
Pcdh20Q8BIZ0 Gm27801-201ENSMUST00000184174 223 ntBASIC18.16■□□□□ 0.5
Pcdh20Q8BIZ0 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.16■□□□□ 0.5
Pcdh20Q8BIZ0 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.16■□□□□ 0.5
Pcdh20Q8BIZ0 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.16■□□□□ 0.5
Pcdh20Q8BIZ0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh20Q8BIZ0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh20Q8BIZ0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcdh20Q8BIZ0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh20Q8BIZ0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh20Q8BIZ0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh20Q8BIZ0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Pcdh20Q8BIZ0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh20Q8BIZ0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh20Q8BIZ0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Pcdh20Q8BIZ0 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh20Q8BIZ0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.15■□□□□ 0.5
Pcdh20Q8BIZ0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh20Q8BIZ0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh20Q8BIZ0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh20Q8BIZ0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh20Q8BIZ0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Pcdh20Q8BIZ0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh20Q8BIZ0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh20Q8BIZ0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh20Q8BIZ0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Pcdh20Q8BIZ0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh20Q8BIZ0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh20Q8BIZ0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh20Q8BIZ0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Pcdh20Q8BIZ0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh20Q8BIZ0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdh20Q8BIZ0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh20Q8BIZ0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh20Q8BIZ0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh20Q8BIZ0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh20Q8BIZ0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh20Q8BIZ0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh20Q8BIZ0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh20Q8BIZ0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh20Q8BIZ0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh20Q8BIZ0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh20Q8BIZ0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh20Q8BIZ0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.14■□□□□ 0.49
Pcdh20Q8BIZ0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh20Q8BIZ0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
Pcdh20Q8BIZ0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh20Q8BIZ0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Pcdh20Q8BIZ0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh20Q8BIZ0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh20Q8BIZ0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Pcdh20Q8BIZ0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh20Q8BIZ0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh20Q8BIZ0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh20Q8BIZ0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.13■□□□□ 0.49
Pcdh20Q8BIZ0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pcdh20Q8BIZ0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh20Q8BIZ0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh20Q8BIZ0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh20Q8BIZ0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh20Q8BIZ0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh20Q8BIZ0 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.13■□□□□ 0.49
Pcdh20Q8BIZ0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh20Q8BIZ0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pcdh20Q8BIZ0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh20Q8BIZ0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh20Q8BIZ0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh20Q8BIZ0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pcdh20Q8BIZ0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh20Q8BIZ0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
Pcdh20Q8BIZ0 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh20Q8BIZ0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh20Q8BIZ0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh20Q8BIZ0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.12■□□□□ 0.49
Pcdh20Q8BIZ0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms