Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.38■□□□□ 0.69
Ccdc40Q8BI79 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc40Q8BI79 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc40Q8BI79 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc40Q8BI79 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc40Q8BI79 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc40Q8BI79 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc40Q8BI79 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Ccdc40Q8BI79 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc40Q8BI79 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc40Q8BI79 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc40Q8BI79 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc40Q8BI79 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc40Q8BI79 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc40Q8BI79 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc40Q8BI79 Gm7860-201ENSMUST00000121190 879 ntBASIC19.37■□□□□ 0.69
Ccdc40Q8BI79 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.37■□□□□ 0.69
Ccdc40Q8BI79 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc40Q8BI79 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc40Q8BI79 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.37■□□□□ 0.69
Ccdc40Q8BI79 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc40Q8BI79 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc40Q8BI79 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc40Q8BI79 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.37■□□□□ 0.69
Ccdc40Q8BI79 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc40Q8BI79 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc40Q8BI79 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc40Q8BI79 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc40Q8BI79 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc40Q8BI79 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc40Q8BI79 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.36■□□□□ 0.69
Ccdc40Q8BI79 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc40Q8BI79 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc40Q8BI79 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc40Q8BI79 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc40Q8BI79 Gm5421-201ENSMUST00000181698 2354 ntBASIC19.36■□□□□ 0.69
Ccdc40Q8BI79 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc40Q8BI79 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc40Q8BI79 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ccdc40Q8BI79 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.35■□□□□ 0.69
Ccdc40Q8BI79 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc40Q8BI79 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc40Q8BI79 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc40Q8BI79 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc40Q8BI79 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc40Q8BI79 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc40Q8BI79 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc40Q8BI79 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Ccdc40Q8BI79 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.35■□□□□ 0.69
Ccdc40Q8BI79 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc40Q8BI79 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc40Q8BI79 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc40Q8BI79 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc40Q8BI79 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.35■□□□□ 0.69
Ccdc40Q8BI79 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc40Q8BI79 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ccdc40Q8BI79 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc40Q8BI79 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc40Q8BI79 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.35■□□□□ 0.69
Ccdc40Q8BI79 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.34■□□□□ 0.69
Ccdc40Q8BI79 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc40Q8BI79 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ccdc40Q8BI79 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc40Q8BI79 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc40Q8BI79 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc40Q8BI79 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc40Q8BI79 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.34■□□□□ 0.69
Ccdc40Q8BI79 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.34■□□□□ 0.69
Ccdc40Q8BI79 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc40Q8BI79 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc40Q8BI79 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc40Q8BI79 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc40Q8BI79 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc40Q8BI79 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc40Q8BI79 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc40Q8BI79 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc40Q8BI79 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Ccdc40Q8BI79 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Ccdc40Q8BI79 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc40Q8BI79 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc40Q8BI79 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc40Q8BI79 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc40Q8BI79 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc40Q8BI79 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc40Q8BI79 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.33■□□□□ 0.68
Ccdc40Q8BI79 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc40Q8BI79 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc40Q8BI79 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc40Q8BI79 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc40Q8BI79 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc40Q8BI79 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc40Q8BI79 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc40Q8BI79 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.32■□□□□ 0.68
Ccdc40Q8BI79 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Ccdc40Q8BI79 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc40Q8BI79 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.32■□□□□ 0.68
Ccdc40Q8BI79 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc40Q8BI79 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.32■□□□□ 0.68
Ccdc40Q8BI79 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc40Q8BI79 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms