Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Samm50Q8BGH2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Samm50Q8BGH2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Samm50Q8BGH2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Samm50Q8BGH2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Samm50Q8BGH2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Samm50Q8BGH2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Samm50Q8BGH2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Samm50Q8BGH2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Samm50Q8BGH2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Samm50Q8BGH2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Samm50Q8BGH2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Samm50Q8BGH2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Samm50Q8BGH2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Samm50Q8BGH2 Gm42778-201ENSMUST00000199644 553 ntBASIC21.82■■□□□ 1.08
Samm50Q8BGH2 Gm42642-201ENSMUST00000200683 355 ntBASIC21.82■■□□□ 1.08
Samm50Q8BGH2 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Samm50Q8BGH2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Samm50Q8BGH2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Samm50Q8BGH2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Samm50Q8BGH2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Samm50Q8BGH2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Samm50Q8BGH2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Samm50Q8BGH2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Samm50Q8BGH2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Samm50Q8BGH2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Samm50Q8BGH2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Samm50Q8BGH2 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Samm50Q8BGH2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Samm50Q8BGH2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.81■■□□□ 1.08
Samm50Q8BGH2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Samm50Q8BGH2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC21.81■■□□□ 1.08
Samm50Q8BGH2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
Samm50Q8BGH2 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.81■■□□□ 1.08
Samm50Q8BGH2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Samm50Q8BGH2 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Samm50Q8BGH2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Samm50Q8BGH2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Samm50Q8BGH2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Samm50Q8BGH2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Samm50Q8BGH2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Samm50Q8BGH2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Samm50Q8BGH2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.8■■□□□ 1.08
Samm50Q8BGH2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Samm50Q8BGH2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Samm50Q8BGH2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Samm50Q8BGH2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Samm50Q8BGH2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Samm50Q8BGH2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Samm50Q8BGH2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Samm50Q8BGH2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Samm50Q8BGH2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Samm50Q8BGH2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.79■■□□□ 1.08
Samm50Q8BGH2 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Samm50Q8BGH2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Samm50Q8BGH2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Samm50Q8BGH2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Samm50Q8BGH2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Samm50Q8BGH2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Samm50Q8BGH2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.78■■□□□ 1.08
Samm50Q8BGH2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Samm50Q8BGH2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Samm50Q8BGH2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.78■■□□□ 1.08
Samm50Q8BGH2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.78■■□□□ 1.08
Samm50Q8BGH2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Samm50Q8BGH2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
Samm50Q8BGH2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Samm50Q8BGH2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Samm50Q8BGH2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Samm50Q8BGH2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Samm50Q8BGH2 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.77■■□□□ 1.08
Samm50Q8BGH2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Samm50Q8BGH2 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Samm50Q8BGH2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Samm50Q8BGH2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Samm50Q8BGH2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Samm50Q8BGH2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Samm50Q8BGH2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Samm50Q8BGH2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Samm50Q8BGH2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.76■■□□□ 1.07
Samm50Q8BGH2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Samm50Q8BGH2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.76■■□□□ 1.07
Samm50Q8BGH2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Samm50Q8BGH2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
Samm50Q8BGH2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Samm50Q8BGH2 Gm18671-201ENSMUST00000214826 683 ntBASIC21.76■■□□□ 1.07
Samm50Q8BGH2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Samm50Q8BGH2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Samm50Q8BGH2 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Samm50Q8BGH2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Samm50Q8BGH2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Samm50Q8BGH2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Samm50Q8BGH2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Samm50Q8BGH2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Samm50Q8BGH2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Samm50Q8BGH2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Samm50Q8BGH2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.75■■□□□ 1.07
Samm50Q8BGH2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Samm50Q8BGH2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Samm50Q8BGH2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms