Protein–RNA interactions for Protein: Q80Z38

Shank2, SH3 and multiple ankyrin repeat domains protein 2, mousemouse

Predictions only

Length 1,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank2Q80Z38 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Shank2Q80Z38 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Shank2Q80Z38 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Shank2Q80Z38 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Shank2Q80Z38 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Shank2Q80Z38 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Shank2Q80Z38 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Shank2Q80Z38 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Shank2Q80Z38 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Shank2Q80Z38 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Shank2Q80Z38 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
Shank2Q80Z38 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC24.35■■□□□ 1.49
Shank2Q80Z38 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
Shank2Q80Z38 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Shank2Q80Z38 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
Shank2Q80Z38 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC24.34■■□□□ 1.49
Shank2Q80Z38 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Shank2Q80Z38 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Shank2Q80Z38 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC24.33■■□□□ 1.49
Shank2Q80Z38 AC107452.1-201ENSMUST00000227963 481 ntBASIC24.33■■□□□ 1.49
Shank2Q80Z38 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Shank2Q80Z38 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC24.33■■□□□ 1.49
Shank2Q80Z38 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC24.33■■□□□ 1.49
Shank2Q80Z38 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Shank2Q80Z38 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Shank2Q80Z38 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC24.32■■□□□ 1.48
Shank2Q80Z38 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Shank2Q80Z38 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Shank2Q80Z38 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Shank2Q80Z38 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Shank2Q80Z38 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
Shank2Q80Z38 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Shank2Q80Z38 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
Shank2Q80Z38 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
Shank2Q80Z38 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC24.32■■□□□ 1.48
Shank2Q80Z38 Mtag2-201ENSMUST00000058665 714 ntBASIC24.32■■□□□ 1.48
Shank2Q80Z38 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Shank2Q80Z38 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Shank2Q80Z38 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Shank2Q80Z38 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Shank2Q80Z38 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Shank2Q80Z38 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Shank2Q80Z38 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Shank2Q80Z38 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Shank2Q80Z38 AC124581.1-201ENSMUST00000225416 1399 ntBASIC24.3■■□□□ 1.48
Shank2Q80Z38 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
Shank2Q80Z38 Gm10013-201ENSMUST00000106074 672 ntBASIC24.3■■□□□ 1.48
Shank2Q80Z38 Gm14464-201ENSMUST00000119658 1254 ntBASIC24.3■■□□□ 1.48
Shank2Q80Z38 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Shank2Q80Z38 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Shank2Q80Z38 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
Shank2Q80Z38 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Shank2Q80Z38 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Shank2Q80Z38 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Shank2Q80Z38 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Shank2Q80Z38 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Shank2Q80Z38 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Shank2Q80Z38 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Shank2Q80Z38 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Shank2Q80Z38 Gm7712-202ENSMUST00000222331 1510 ntBASIC24.28■■□□□ 1.48
Shank2Q80Z38 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Shank2Q80Z38 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Shank2Q80Z38 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Shank2Q80Z38 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC24.28■■□□□ 1.48
Shank2Q80Z38 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Shank2Q80Z38 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC24.28■■□□□ 1.48
Shank2Q80Z38 Gm37292-201ENSMUST00000192062 758 ntBASIC24.28■■□□□ 1.48
Shank2Q80Z38 Gm10138-203ENSMUST00000206952 366 ntBASIC24.28■■□□□ 1.48
Shank2Q80Z38 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Shank2Q80Z38 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC24.28■■□□□ 1.48
Shank2Q80Z38 Zfp783-201ENSMUST00000095946 670 ntBASIC24.28■■□□□ 1.48
Shank2Q80Z38 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Shank2Q80Z38 Gm45560-201ENSMUST00000211492 1472 ntBASIC24.28■■□□□ 1.48
Shank2Q80Z38 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Shank2Q80Z38 Gm15375-201ENSMUST00000119510 849 ntBASIC24.27■■□□□ 1.48
Shank2Q80Z38 AA414768-201ENSMUST00000121924 1257 ntBASIC24.27■■□□□ 1.48
Shank2Q80Z38 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Shank2Q80Z38 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Shank2Q80Z38 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Shank2Q80Z38 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC24.27■■□□□ 1.48
Shank2Q80Z38 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Shank2Q80Z38 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC24.26■■□□□ 1.47
Shank2Q80Z38 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Shank2Q80Z38 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Shank2Q80Z38 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Shank2Q80Z38 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Shank2Q80Z38 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Shank2Q80Z38 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Shank2Q80Z38 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Shank2Q80Z38 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Shank2Q80Z38 Gm42545-201ENSMUST00000202755 922 ntBASIC24.26■■□□□ 1.47
Shank2Q80Z38 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC24.26■■□□□ 1.47
Shank2Q80Z38 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC24.25■■□□□ 1.47
Shank2Q80Z38 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Shank2Q80Z38 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Shank2Q80Z38 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Shank2Q80Z38 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Shank2Q80Z38 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC24.25■■□□□ 1.47
Shank2Q80Z38 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
Shank2Q80Z38 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms