Protein–RNA interactions for Protein: Q80YR3

Skida1, SKI/DACH domain-containing protein 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skida1Q80YR3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Skida1Q80YR3 Gm12752-201ENSMUST00000121657 811 ntBASIC18.38■□□□□ 0.53
Skida1Q80YR3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Skida1Q80YR3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Skida1Q80YR3 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Skida1Q80YR3 Gm4968-201ENSMUST00000071458 858 ntBASIC18.38■□□□□ 0.53
Skida1Q80YR3 Vmn1r192-201ENSMUST00000072632 1067 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Skida1Q80YR3 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Skida1Q80YR3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Skida1Q80YR3 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Skida1Q80YR3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Skida1Q80YR3 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Skida1Q80YR3 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Skida1Q80YR3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Skida1Q80YR3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.37■□□□□ 0.53
Skida1Q80YR3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Skida1Q80YR3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Skida1Q80YR3 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC18.37■□□□□ 0.53
Skida1Q80YR3 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Skida1Q80YR3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.37■□□□□ 0.53
Skida1Q80YR3 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC18.37■□□□□ 0.53
Skida1Q80YR3 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Skida1Q80YR3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Skida1Q80YR3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Skida1Q80YR3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Skida1Q80YR3 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.37■□□□□ 0.53
Skida1Q80YR3 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Skida1Q80YR3 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Skida1Q80YR3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Skida1Q80YR3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Skida1Q80YR3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Skida1Q80YR3 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Skida1Q80YR3 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC18.36■□□□□ 0.53
Skida1Q80YR3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Skida1Q80YR3 Gm5656-201ENSMUST00000171020 1096 ntBASIC18.36■□□□□ 0.53
Skida1Q80YR3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Skida1Q80YR3 Gm28975-201ENSMUST00000186412 686 ntBASIC18.36■□□□□ 0.53
Skida1Q80YR3 Gm37533-201ENSMUST00000193848 545 ntBASIC18.36■□□□□ 0.53
Skida1Q80YR3 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Skida1Q80YR3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Skida1Q80YR3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Skida1Q80YR3 AC165260.5-201ENSMUST00000224640 1247 ntBASIC18.36■□□□□ 0.53
Skida1Q80YR3 AC159205.7-201ENSMUST00000225988 692 ntBASIC18.36■□□□□ 0.53
Skida1Q80YR3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Skida1Q80YR3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Skida1Q80YR3 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Skida1Q80YR3 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Skida1Q80YR3 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Skida1Q80YR3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Skida1Q80YR3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Skida1Q80YR3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Skida1Q80YR3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Skida1Q80YR3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Skida1Q80YR3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.35■□□□□ 0.53
Skida1Q80YR3 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC18.35■□□□□ 0.53
Skida1Q80YR3 Gm8520-201ENSMUST00000186517 868 ntBASIC18.35■□□□□ 0.53
Skida1Q80YR3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.35■□□□□ 0.53
Skida1Q80YR3 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Skida1Q80YR3 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Skida1Q80YR3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Skida1Q80YR3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Skida1Q80YR3 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Skida1Q80YR3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Skida1Q80YR3 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Skida1Q80YR3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Skida1Q80YR3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Skida1Q80YR3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Skida1Q80YR3 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Skida1Q80YR3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Skida1Q80YR3 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Skida1Q80YR3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Skida1Q80YR3 Gm37709-201ENSMUST00000195074 600 ntBASIC18.34■□□□□ 0.53
Skida1Q80YR3 CT009711.2-202ENSMUST00000224538 973 ntBASIC18.34■□□□□ 0.53
Skida1Q80YR3 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Skida1Q80YR3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Skida1Q80YR3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Skida1Q80YR3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.34■□□□□ 0.53
Skida1Q80YR3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Skida1Q80YR3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Skida1Q80YR3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Skida1Q80YR3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Skida1Q80YR3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Skida1Q80YR3 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.33■□□□□ 0.53
Skida1Q80YR3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Skida1Q80YR3 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Skida1Q80YR3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Skida1Q80YR3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.33■□□□□ 0.52
Skida1Q80YR3 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC18.33■□□□□ 0.52
Skida1Q80YR3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Skida1Q80YR3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Skida1Q80YR3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Skida1Q80YR3 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Skida1Q80YR3 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Skida1Q80YR3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Skida1Q80YR3 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Skida1Q80YR3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Skida1Q80YR3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Skida1Q80YR3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Skida1Q80YR3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Skida1Q80YR3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms