Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Gm45102-201ENSMUST00000207427 857 ntBASIC15.79■□□□□ 0.12
Upk3bQ80YF6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upk3bQ80YF6 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.79■□□□□ 0.12
Upk3bQ80YF6 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.79■□□□□ 0.12
Upk3bQ80YF6 Rps24-207ENSMUST00000224568 714 ntBASIC15.79■□□□□ 0.12
Upk3bQ80YF6 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upk3bQ80YF6 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Upk3bQ80YF6 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Upk3bQ80YF6 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Upk3bQ80YF6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upk3bQ80YF6 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upk3bQ80YF6 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upk3bQ80YF6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upk3bQ80YF6 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upk3bQ80YF6 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Upk3bQ80YF6 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upk3bQ80YF6 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Upk3bQ80YF6 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Upk3bQ80YF6 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Upk3bQ80YF6 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Upk3bQ80YF6 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Upk3bQ80YF6 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Upk3bQ80YF6 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Upk3bQ80YF6 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Upk3bQ80YF6 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Upk3bQ80YF6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Upk3bQ80YF6 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Upk3bQ80YF6 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Upk3bQ80YF6 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Upk3bQ80YF6 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Upk3bQ80YF6 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Upk3bQ80YF6 Gm14117-201ENSMUST00000122417 843 ntBASIC15.78■□□□□ 0.12
Upk3bQ80YF6 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC15.78■□□□□ 0.12
Upk3bQ80YF6 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC15.78■□□□□ 0.12
Upk3bQ80YF6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Upk3bQ80YF6 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Upk3bQ80YF6 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Upk3bQ80YF6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Upk3bQ80YF6 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Upk3bQ80YF6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Upk3bQ80YF6 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.78■□□□□ 0.12
Upk3bQ80YF6 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Upk3bQ80YF6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Upk3bQ80YF6 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Upk3bQ80YF6 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.78■□□□□ 0.12
Upk3bQ80YF6 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Upk3bQ80YF6 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Upk3bQ80YF6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Upk3bQ80YF6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Upk3bQ80YF6 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Upk3bQ80YF6 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC15.77■□□□□ 0.12
Upk3bQ80YF6 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Upk3bQ80YF6 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Upk3bQ80YF6 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Upk3bQ80YF6 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.77■□□□□ 0.11
Upk3bQ80YF6 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Upk3bQ80YF6 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Upk3bQ80YF6 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.76■□□□□ 0.11
Upk3bQ80YF6 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.76■□□□□ 0.11
Upk3bQ80YF6 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.76■□□□□ 0.11
Upk3bQ80YF6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Upk3bQ80YF6 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Upk3bQ80YF6 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Upk3bQ80YF6 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Upk3bQ80YF6 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Upk3bQ80YF6 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Upk3bQ80YF6 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Upk3bQ80YF6 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Upk3bQ80YF6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Upk3bQ80YF6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Upk3bQ80YF6 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Upk3bQ80YF6 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Upk3bQ80YF6 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Upk3bQ80YF6 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Upk3bQ80YF6 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Upk3bQ80YF6 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Upk3bQ80YF6 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Upk3bQ80YF6 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Upk3bQ80YF6 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Upk3bQ80YF6 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Upk3bQ80YF6 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.75■□□□□ 0.11
Upk3bQ80YF6 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.75■□□□□ 0.11
Upk3bQ80YF6 Spcs1-204ENSMUST00000226782 949 ntBASIC15.75■□□□□ 0.11
Upk3bQ80YF6 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Upk3bQ80YF6 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Upk3bQ80YF6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Upk3bQ80YF6 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Upk3bQ80YF6 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Upk3bQ80YF6 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Upk3bQ80YF6 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Upk3bQ80YF6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Upk3bQ80YF6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Upk3bQ80YF6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Upk3bQ80YF6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Upk3bQ80YF6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Upk3bQ80YF6 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Upk3bQ80YF6 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Upk3bQ80YF6 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Upk3bQ80YF6 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.74■□□□□ 0.11
Upk3bQ80YF6 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms