Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Vrk1Q80X41 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vrk1Q80X41 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vrk1Q80X41 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Vrk1Q80X41 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vrk1Q80X41 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vrk1Q80X41 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vrk1Q80X41 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Vrk1Q80X41 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Vrk1Q80X41 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Vrk1Q80X41 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vrk1Q80X41 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vrk1Q80X41 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vrk1Q80X41 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vrk1Q80X41 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.79■□□□□ 0.44
Vrk1Q80X41 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vrk1Q80X41 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vrk1Q80X41 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vrk1Q80X41 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vrk1Q80X41 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vrk1Q80X41 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.79■□□□□ 0.44
Vrk1Q80X41 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.79■□□□□ 0.44
Vrk1Q80X41 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vrk1Q80X41 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vrk1Q80X41 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vrk1Q80X41 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Vrk1Q80X41 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vrk1Q80X41 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vrk1Q80X41 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.78■□□□□ 0.44
Vrk1Q80X41 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.78■□□□□ 0.44
Vrk1Q80X41 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.78■□□□□ 0.44
Vrk1Q80X41 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.78■□□□□ 0.44
Vrk1Q80X41 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.78■□□□□ 0.44
Vrk1Q80X41 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Vrk1Q80X41 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vrk1Q80X41 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vrk1Q80X41 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vrk1Q80X41 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vrk1Q80X41 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Vrk1Q80X41 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vrk1Q80X41 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Vrk1Q80X41 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vrk1Q80X41 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vrk1Q80X41 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.77■□□□□ 0.44
Vrk1Q80X41 Gm5643-201ENSMUST00000117081 966 ntBASIC17.77■□□□□ 0.44
Vrk1Q80X41 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.77■□□□□ 0.44
Vrk1Q80X41 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vrk1Q80X41 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Vrk1Q80X41 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vrk1Q80X41 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vrk1Q80X41 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vrk1Q80X41 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Vrk1Q80X41 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vrk1Q80X41 Dio3-201ENSMUST00000097228 1449 ntBASIC17.76■□□□□ 0.43
Vrk1Q80X41 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vrk1Q80X41 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.76■□□□□ 0.43
Vrk1Q80X41 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.76■□□□□ 0.43
Vrk1Q80X41 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Vrk1Q80X41 Mir7071-201ENSMUST00000184847 69 ntBASIC17.76■□□□□ 0.43
Vrk1Q80X41 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.76■□□□□ 0.43
Vrk1Q80X41 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vrk1Q80X41 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vrk1Q80X41 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vrk1Q80X41 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vrk1Q80X41 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vrk1Q80X41 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vrk1Q80X41 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Vrk1Q80X41 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Vrk1Q80X41 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vrk1Q80X41 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vrk1Q80X41 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Vrk1Q80X41 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.75■□□□□ 0.43
Vrk1Q80X41 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.75■□□□□ 0.43
Vrk1Q80X41 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vrk1Q80X41 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vrk1Q80X41 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Vrk1Q80X41 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vrk1Q80X41 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vrk1Q80X41 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vrk1Q80X41 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.74■□□□□ 0.43
Vrk1Q80X41 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Vrk1Q80X41 Mir6982-201ENSMUST00000184354 68 ntBASIC17.74■□□□□ 0.43
Vrk1Q80X41 Gm44549-201ENSMUST00000208351 577 ntBASIC17.74■□□□□ 0.43
Vrk1Q80X41 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vrk1Q80X41 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vrk1Q80X41 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vrk1Q80X41 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vrk1Q80X41 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vrk1Q80X41 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vrk1Q80X41 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vrk1Q80X41 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vrk1Q80X41 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Vrk1Q80X41 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Vrk1Q80X41 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vrk1Q80X41 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vrk1Q80X41 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vrk1Q80X41 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vrk1Q80X41 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.73■□□□□ 0.43
Vrk1Q80X41 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vrk1Q80X41 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms