Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Prpf40bQ80W14 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Prpf40bQ80W14 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Prpf40bQ80W14 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Prpf40bQ80W14 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Prpf40bQ80W14 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Prpf40bQ80W14 Gm12896-201ENSMUST00000118430 226 ntBASIC21.51■■□□□ 1.03
Prpf40bQ80W14 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21.51■■□□□ 1.03
Prpf40bQ80W14 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Prpf40bQ80W14 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Prpf40bQ80W14 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Prpf40bQ80W14 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.51■■□□□ 1.03
Prpf40bQ80W14 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Prpf40bQ80W14 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Prpf40bQ80W14 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Prpf40bQ80W14 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Prpf40bQ80W14 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Prpf40bQ80W14 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Prpf40bQ80W14 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.5■■□□□ 1.03
Prpf40bQ80W14 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Prpf40bQ80W14 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Prpf40bQ80W14 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Prpf40bQ80W14 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.5■■□□□ 1.03
Prpf40bQ80W14 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
Prpf40bQ80W14 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.49■■□□□ 1.03
Prpf40bQ80W14 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Prpf40bQ80W14 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.49■■□□□ 1.03
Prpf40bQ80W14 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Prpf40bQ80W14 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.49■■□□□ 1.03
Prpf40bQ80W14 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Prpf40bQ80W14 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Prpf40bQ80W14 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Prpf40bQ80W14 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Prpf40bQ80W14 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Prpf40bQ80W14 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Prpf40bQ80W14 Gm15565-201ENSMUST00000118890 427 ntBASIC21.48■■□□□ 1.03
Prpf40bQ80W14 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.48■■□□□ 1.03
Prpf40bQ80W14 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Prpf40bQ80W14 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.48■■□□□ 1.03
Prpf40bQ80W14 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.48■■□□□ 1.03
Prpf40bQ80W14 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Prpf40bQ80W14 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf40bQ80W14 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC21.47■■□□□ 1.03
Prpf40bQ80W14 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.47■■□□□ 1.03
Prpf40bQ80W14 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf40bQ80W14 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf40bQ80W14 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.47■■□□□ 1.03
Prpf40bQ80W14 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf40bQ80W14 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Prpf40bQ80W14 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf40bQ80W14 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf40bQ80W14 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.47■■□□□ 1.03
Prpf40bQ80W14 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf40bQ80W14 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf40bQ80W14 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf40bQ80W14 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Prpf40bQ80W14 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.46■■□□□ 1.03
Prpf40bQ80W14 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.46■■□□□ 1.03
Prpf40bQ80W14 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf40bQ80W14 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf40bQ80W14 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
Prpf40bQ80W14 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf40bQ80W14 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf40bQ80W14 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Prpf40bQ80W14 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf40bQ80W14 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf40bQ80W14 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf40bQ80W14 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf40bQ80W14 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf40bQ80W14 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf40bQ80W14 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf40bQ80W14 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.45■■□□□ 1.02
Prpf40bQ80W14 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf40bQ80W14 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf40bQ80W14 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf40bQ80W14 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf40bQ80W14 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf40bQ80W14 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC21.45■■□□□ 1.02
Prpf40bQ80W14 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf40bQ80W14 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf40bQ80W14 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf40bQ80W14 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf40bQ80W14 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf40bQ80W14 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Prpf40bQ80W14 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC21.44■■□□□ 1.02
Prpf40bQ80W14 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.44■■□□□ 1.02
Prpf40bQ80W14 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf40bQ80W14 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Prpf40bQ80W14 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Prpf40bQ80W14 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Prpf40bQ80W14 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf40bQ80W14 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf40bQ80W14 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf40bQ80W14 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf40bQ80W14 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.44■■□□□ 1.02
Prpf40bQ80W14 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf40bQ80W14 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf40bQ80W14 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf40bQ80W14 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf40bQ80W14 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms