Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC29.23■■■□□ 2.27
Rpap1Q80TE0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Rpap1Q80TE0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Rpap1Q80TE0 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Rpap1Q80TE0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Rpap1Q80TE0 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Rpap1Q80TE0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC29.22■■■□□ 2.27
Rpap1Q80TE0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Rpap1Q80TE0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Rpap1Q80TE0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC29.22■■■□□ 2.27
Rpap1Q80TE0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC29.22■■■□□ 2.27
Rpap1Q80TE0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Rpap1Q80TE0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Rpap1Q80TE0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Rpap1Q80TE0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Rpap1Q80TE0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
Rpap1Q80TE0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Rpap1Q80TE0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC29.21■■■□□ 2.27
Rpap1Q80TE0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Rpap1Q80TE0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC29.21■■■□□ 2.27
Rpap1Q80TE0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Rpap1Q80TE0 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Rpap1Q80TE0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Rpap1Q80TE0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Rpap1Q80TE0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC29.21■■■□□ 2.27
Rpap1Q80TE0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC29.2■■■□□ 2.27
Rpap1Q80TE0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.27
Rpap1Q80TE0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.27
Rpap1Q80TE0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC29.2■■■□□ 2.27
Rpap1Q80TE0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Rpap1Q80TE0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Rpap1Q80TE0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Rpap1Q80TE0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
Rpap1Q80TE0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Rpap1Q80TE0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC29.2■■■□□ 2.26
Rpap1Q80TE0 Gm21814-202ENSMUST00000203277 873 ntBASIC29.2■■■□□ 2.26
Rpap1Q80TE0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC29.19■■■□□ 2.26
Rpap1Q80TE0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC29.19■■■□□ 2.26
Rpap1Q80TE0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Rpap1Q80TE0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Rpap1Q80TE0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
Rpap1Q80TE0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Rpap1Q80TE0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Rpap1Q80TE0 Gm10819-201ENSMUST00000099988 561 ntBASIC29.18■■■□□ 2.26
Rpap1Q80TE0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC29.18■■■□□ 2.26
Rpap1Q80TE0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC29.18■■■□□ 2.26
Rpap1Q80TE0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC29.18■■■□□ 2.26
Rpap1Q80TE0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC29.17■■■□□ 2.26
Rpap1Q80TE0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Rpap1Q80TE0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Rpap1Q80TE0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC29.17■■■□□ 2.26
Rpap1Q80TE0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC29.17■■■□□ 2.26
Rpap1Q80TE0 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Rpap1Q80TE0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Rpap1Q80TE0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Rpap1Q80TE0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC29.17■■■□□ 2.26
Rpap1Q80TE0 Mtag2-201ENSMUST00000058665 714 ntBASIC29.17■■■□□ 2.26
Rpap1Q80TE0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Rpap1Q80TE0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Rpap1Q80TE0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Rpap1Q80TE0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Rpap1Q80TE0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Rpap1Q80TE0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC29.16■■■□□ 2.26
Rpap1Q80TE0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC29.16■■■□□ 2.26
Rpap1Q80TE0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC29.16■■■□□ 2.26
Rpap1Q80TE0 AC107452.1-201ENSMUST00000227963 481 ntBASIC29.16■■■□□ 2.26
Rpap1Q80TE0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC29.15■■■□□ 2.26
Rpap1Q80TE0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC29.15■■■□□ 2.26
Rpap1Q80TE0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
Rpap1Q80TE0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC29.15■■■□□ 2.26
Rpap1Q80TE0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Rpap1Q80TE0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC29.15■■■□□ 2.26
Rpap1Q80TE0 Gm16042-201ENSMUST00000204813 1247 ntBASIC29.15■■■□□ 2.26
Rpap1Q80TE0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Rpap1Q80TE0 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC29.14■■■□□ 2.26
Rpap1Q80TE0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC29.14■■■□□ 2.26
Rpap1Q80TE0 Arhgef4-208ENSMUST00000211073 171 ntBASIC29.14■■■□□ 2.26
Rpap1Q80TE0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Rpap1Q80TE0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.26
Rpap1Q80TE0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Rpap1Q80TE0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC29.13■■■□□ 2.25
Rpap1Q80TE0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC29.13■■■□□ 2.25
Rpap1Q80TE0 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC29.13■■■□□ 2.25
Rpap1Q80TE0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC29.13■■■□□ 2.25
Rpap1Q80TE0 Zfp783-201ENSMUST00000095946 670 ntBASIC29.13■■■□□ 2.25
Rpap1Q80TE0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC29.13■■■□□ 2.25
Rpap1Q80TE0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC29.12■■■□□ 2.25
Rpap1Q80TE0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Rpap1Q80TE0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Rpap1Q80TE0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC29.12■■■□□ 2.25
Rpap1Q80TE0 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC29.12■■■□□ 2.25
Rpap1Q80TE0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Rpap1Q80TE0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Rpap1Q80TE0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Rpap1Q80TE0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC29.12■■■□□ 2.25
Rpap1Q80TE0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Rpap1Q80TE0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Rpap1Q80TE0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
Rpap1Q80TE0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Rpap1Q80TE0 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC29.11■■■□□ 2.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms