Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx4Q7TNK1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx4Q7TNK1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx4Q7TNK1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx4Q7TNK1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx4Q7TNK1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx4Q7TNK1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx4Q7TNK1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx4Q7TNK1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx4Q7TNK1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Rfx4Q7TNK1 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Rfx4Q7TNK1 Gm7417-201ENSMUST00000192950 473 ntBASIC17.91■□□□□ 0.46
Rfx4Q7TNK1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx4Q7TNK1 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx4Q7TNK1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Rfx4Q7TNK1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx4Q7TNK1 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.9■□□□□ 0.46
Rfx4Q7TNK1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.9■□□□□ 0.46
Rfx4Q7TNK1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx4Q7TNK1 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx4Q7TNK1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.9■□□□□ 0.46
Rfx4Q7TNK1 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx4Q7TNK1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
Rfx4Q7TNK1 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx4Q7TNK1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Rfx4Q7TNK1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx4Q7TNK1 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.9■□□□□ 0.46
Rfx4Q7TNK1 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Rfx4Q7TNK1 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.9■□□□□ 0.46
Rfx4Q7TNK1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Rfx4Q7TNK1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx4Q7TNK1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx4Q7TNK1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx4Q7TNK1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx4Q7TNK1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx4Q7TNK1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rfx4Q7TNK1 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.89■□□□□ 0.46
Rfx4Q7TNK1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Rfx4Q7TNK1 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx4Q7TNK1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Rfx4Q7TNK1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx4Q7TNK1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx4Q7TNK1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx4Q7TNK1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx4Q7TNK1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.89■□□□□ 0.45
Rfx4Q7TNK1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.89■□□□□ 0.45
Rfx4Q7TNK1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
Rfx4Q7TNK1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx4Q7TNK1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx4Q7TNK1 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.89■□□□□ 0.45
Rfx4Q7TNK1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx4Q7TNK1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx4Q7TNK1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx4Q7TNK1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Rfx4Q7TNK1 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Rfx4Q7TNK1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx4Q7TNK1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx4Q7TNK1 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx4Q7TNK1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx4Q7TNK1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Rfx4Q7TNK1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx4Q7TNK1 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Rfx4Q7TNK1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Rfx4Q7TNK1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx4Q7TNK1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Rfx4Q7TNK1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Rfx4Q7TNK1 Gm15820-201ENSMUST00000201566 728 ntBASIC17.88■□□□□ 0.45
Rfx4Q7TNK1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx4Q7TNK1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx4Q7TNK1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx4Q7TNK1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.88■□□□□ 0.45
Rfx4Q7TNK1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx4Q7TNK1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx4Q7TNK1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx4Q7TNK1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx4Q7TNK1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx4Q7TNK1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx4Q7TNK1 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx4Q7TNK1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx4Q7TNK1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx4Q7TNK1 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx4Q7TNK1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Rfx4Q7TNK1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.87■□□□□ 0.45
Rfx4Q7TNK1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx4Q7TNK1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx4Q7TNK1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx4Q7TNK1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx4Q7TNK1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx4Q7TNK1 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx4Q7TNK1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx4Q7TNK1 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx4Q7TNK1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx4Q7TNK1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx4Q7TNK1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx4Q7TNK1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx4Q7TNK1 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx4Q7TNK1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Rfx4Q7TNK1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Rfx4Q7TNK1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx4Q7TNK1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms